| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1890 |
|---|
| Symbol | |
|---|
| ID | 7978721 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 1942754 |
|---|
| End bp | 1943269 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644798722 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_002949892 |
|---|
| Protein GI | 239827268 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.326681 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TCATTGTCGC TATATTGCTG CTTGCTATTA CTGGATACGG CATTTGGAAT
GCGTTGGCAG CAGAAAAAGC AAAGGAAGTC GGTCTTTCTG TAGGTAACGC TGCGCCCGAT
TTTTCATTGC AGACATTGAA TGGCCAAACG GTACATTTAT CTGATTTTCG CGGAAAGCCG
GTAATCGTCA ATTTTTGGAC AACATGGTGC CCGCCGTGTA AAAAAGAAAT GCCTGATATG
GAAAAATTTT ATAAAGCCTA TCATTCTGAC GTGGAATTGC TTGCGGTTCA TTTAACGTCG
CAAGATACTC GTGAAAATGT AAAGTCATTT ATCAATGAAT ATCAACTATC GTTTCCAGTG
GTGTTGGATG AAAAAAAGAA AGCATTAGAA CTATATCATA TTCAAACGAT TCCAACATCG
TATATCATTG ATAAAGATGG TGTCATTCGC AAAAAAATTA TCGGTCCGAT GACATATAAA
CAAATGGTGG AAATAACAGC GGCATTCCGT GAATAA
|
|---|
| Protein sequence | MKKFIVAILL LAITGYGIWN ALAAEKAKEV GLSVGNAAPD FSLQTLNGQT VHLSDFRGKP
VIVNFWTTWC PPCKKEMPDM EKFYKAYHSD VELLAVHLTS QDTRENVKSF INEYQLSFPV
VLDEKKKALE LYHIQTIPTS YIIDKDGVIR KKIIGPMTYK QMVEITAAFR E
|
|---|
| |