Gene GWCH70_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1862 
Symbol 
ID7976483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1926252 
End bp1927097 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content41% 
IMG OID644798696 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_002949866 
Protein GI239827242 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.018097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGC TGTTTCGATG GATGATTTTT GTATTGCTTT TTTTATTTAG CGGATGCAGT 
CAATGGAATG ATTTTCCAGG GGAACATGAA AAAGCATCAG ATAAAACGAA TAAACATATA
ATCACTCATC ATGAAAAGAA AGAAAATGAA ACGCCAAAAA AACCGGATGA TTCTAAAGAT
CGTGAAGCGA TAGATCCGGA TCTATTGTTA GAACCGGAAT ATTGGAATAT TGTTGAAGTG
CAAAACGGCC AGAAAGTGAT TATGAACCCA AGTAATATAT TAGCGCTTGT GAATAAAGAA
CAATCGCTGC CAGCTGCATA TAAGCCGAAC GATTTAGTTG CACCGCGCGT TCCGTTTTCG
TTTGCCGAAA AAAATGTGGA CAAGCGGTAT ATGCGCGCCG AGGCAGCGAA AGCGCTCGAA
GCGTTATTTG CTGCCGCTCG TAAAGAAGGA ATCCAGCTTG TAGCCGTGTC TGGCTATCGT
TCATATGAGC GCCAAAAAAT GATATTTGCG GAAGAAGTAA AAGAAAAAGG AAAAGAGAGG
GCGATTCATG CGGTCGCACT GCCAGGGCAG AGCGAACATC AAACTGGATT GGCAATGGAT
ATAACAAGCC AAAGTGTTGG GTACAAATTG ACGACTGCTT TTGGAGAAAC AAAAGAAGGA
AAATGGGTCG CCCTGCATGC GCATGAGTAC GGATTTATTA TTCGCTACCC AAAAGGAAAA
GAAGCGATTA CGGGATACCA ATATGAGCCG TGGCATCTTC GGTATGTCGG CAAAAAAGCA
GCAAAAGTGA TGTTTGAAAG ACAAATTACG TTAGAAGAGT ATTTTCAAAT CGTAAGGAAA
ATGTAA
 
Protein sequence
MKQLFRWMIF VLLFLFSGCS QWNDFPGEHE KASDKTNKHI ITHHEKKENE TPKKPDDSKD 
REAIDPDLLL EPEYWNIVEV QNGQKVIMNP SNILALVNKE QSLPAAYKPN DLVAPRVPFS
FAEKNVDKRY MRAEAAKALE ALFAAARKEG IQLVAVSGYR SYERQKMIFA EEVKEKGKER
AIHAVALPGQ SEHQTGLAMD ITSQSVGYKL TTAFGETKEG KWVALHAHEY GFIIRYPKGK
EAITGYQYEP WHLRYVGKKA AKVMFERQIT LEEYFQIVRK M