Gene GWCH70_1834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1834 
Symbol 
ID7976457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand- 
Start bp1900317 
End bp1900955 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content41% 
IMG OID644798670 
Productmultidrug resistance protein A 
Protein accessionYP_002949840 
Protein GI239827216 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00170419 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGTAA AAAGATTAAT CACATTAAAT ATTATTGTTC TTATTTTACT TGTAGGAGGC 
GGCTTTGCTG CTTACTATTA TCTAAATGAA GTAACAAATT ATATTAAAAC GGACAATGCG 
CGTATTGACG GTCAAGCCAT TTCTATTGCT TCGCCGCTTT CTGGAAAATT GACTAGTTGG 
TCCGGAAATG TAGGAAAAAC GTTTAATAGC GGCGATCAAA TCGGTGAAGT ATCAGACGGG 
AAACATAACA TTCCGATCAC CGTTCCACAT CATATGACGA TCGTCCAACA AAATGCCGTC 
GAAAATTCGT TTGTCCCAGC GGGAATGACG TTGGCGCGCG GCTATGATTT AGACGATTTA 
TGGGTGACGG CAAATATAGA AGAAACAGAT ATTGAAGATG TCAAAGTAGG CCAAGATGTT 
GATATTTATG TGGACGCCTA TCCAGATCGC AAATTTACGG GGAAAGTAGA GAAACTTGGA 
TATGCGACTG CCAACACATT TAGCTTGCTT CCAAGTTCCA ATAATACAGG GAACTATACG 
AAGGTGACGC AAGTAATTCC GGTTACGATT TCGATTGACG ATGATAACGG GGCGGGGCTA 
GTACCAGGAA TGAACGTCAC TGTTCGCATT CACAAGTAG
 
Protein sequence
MNVKRLITLN IIVLILLVGG GFAAYYYLNE VTNYIKTDNA RIDGQAISIA SPLSGKLTSW 
SGNVGKTFNS GDQIGEVSDG KHNIPITVPH HMTIVQQNAV ENSFVPAGMT LARGYDLDDL 
WVTANIEETD IEDVKVGQDV DIYVDAYPDR KFTGKVEKLG YATANTFSLL PSSNNTGNYT 
KVTQVIPVTI SIDDDNGAGL VPGMNVTVRI HK