Gene GWCH70_1622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1622 
Symbol 
ID7976270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1696919 
End bp1697659 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content37% 
IMG OID644798506 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002949678 
Protein GI239827054 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02404] trehalose operon repressor, B. subtilis-type 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATACAAT ACATGTCGGT GAGCGAAATG TATGAAAATA AATATTTATC CATTTATCAC 
GATCTTGTGG AAAAAATTCG TCAAGGACAT TGGAAACCGT ATGACAAACT GCCGTCGGAA
AACGAACTTA CCGAACGATA TAACACATCG AGAGAGACGA TTCGCAAAGC GCTCAATTTA
CTATCCGAAC ATGGTTATAT CCAAAAAATG AAAGGAAAAG GCTCCATCGT TTTGGATGTT
GGCAAATACG ATTTTCCGGT ATCTGGGCTA GTGAGTTTTA AAGAATTGGC CCAAAACATG
AAACAGCCTG TAAAAACGAT CGTAAATGAG TTGGAAGTAA TTAAACCAGA TCCATATTTA
AAGCGGCATT TGCACGCGAC AAGCAAAGAT GAAATATGGA AAGTCATTCG TTCCCGTGAA
ATTGAGGGAG AACGAATCAT TTTAGACAAA GATTTTTTTC ATAAAAAATA TGTTCCGACA
TTGACGCGGG AAATATGTGA AGATTCGATT TATGAATATT TGGAGAAACA GTTAAAACTG
AAAATCAGCT TTGCGAAAAA AGAAATGTTT GTCGATAAAG TCAATGAAGA GGATCGAAAA
TATTTAGATT TAAATGGCTA TGACCATGTT GTGGTTGTAA AAAATTTCGT CTATTTAGAT
GACGCTACGT TATTTCAATA TACAGAGTCG CGCCACCGTC TCGATAAATT CCGTTTCGTC
GATTTTGCAA GGCGGAAGTA A
 
Protein sequence
MIQYMSVSEM YENKYLSIYH DLVEKIRQGH WKPYDKLPSE NELTERYNTS RETIRKALNL 
LSEHGYIQKM KGKGSIVLDV GKYDFPVSGL VSFKELAQNM KQPVKTIVNE LEVIKPDPYL
KRHLHATSKD EIWKVIRSRE IEGERIILDK DFFHKKYVPT LTREICEDSI YEYLEKQLKL
KISFAKKEMF VDKVNEEDRK YLDLNGYDHV VVVKNFVYLD DATLFQYTES RHRLDKFRFV
DFARRK