| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1620 |
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| Symbol | |
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| ID | 7976268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 1693698 |
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| End bp | 1695113 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644798504 |
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| Product | PTS system, trehalose-specific IIBC subunit |
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| Protein accession | YP_002949676 |
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| Protein GI | 239827052 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01992] PTS system, trehalose-specific IIBC component
[TIGR01996] PTS system, sucrose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000938635 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGCAT ATGAACAATC GGTTGCTAAA ATTGTCGAAG CAATTGGTGG AAAAGAAAAT
ATTGTTGCCG CCACCCATTG TGTCACGCGT TTGCGTTTTG CGTTGAAAGA TGAGGGGAAA
GTCGATAAAG AGAAATTAGA AAGCATTGAT ATTGTAAAAG GTTCATTTTC CGCGAACGGT
CAATTTCAAG TAGTTATCGG ACAAGGGCTT GTCGATAAAG TATATAACGA AATGGTGGAA
ATGACCGGCA TTGGAAGAGC GACAAAACAA GAGATTAAAG ATGCGGCAGA AGCGAAGTTA
AATCCGCTGC AACGCGCCAT TAAAACATTA GCAGATATCT TTATCCCGAT TTTGCCGGCG
ATTGTGACAG CTGGTTTGTT AATGGGGATT AACAACATCT TAACAGGTCC GGGTATTTTT
TATGAAGGCA AATCGTTTGT CGAAGTGCAC AAAGAATGGG CAGATCTTGC TAGCATGATT
AACCTTATTG CAAATACGGC GTTCGTCTTC TTGCCTGGCT TAATCGGATG GTCGGCAGTG
ACAAAGTTTG GCGGAAGCCC GCTTTTGGGA ATTGTCCTCG GTTTGATGCT TGTCCATCCT
GATTTGTTAA ATGCATGGGG ATGGGGAGCA GCGAAAGAAA AAGGGGAAAT TCCTATTTGG
AATTTATTCG GATTTGAAGT GCAAAAAGTC GGATATCAAG GCCAAGTGCT GCCGGTGCTT
GTAGCGTCTT ATGTACTTGC GAAAATCGAG CAATTTTTAC GTAAACGTAT ACCGGATGCA
TTTCAATTGT TGCTTGTTGC ACCGCTTGCG TTATTAATTA CGGGCTTTTT AGCATTTATT
GCAATTGGAC CGATTACGTT TGCGATCGGA AATGCGATTA CAAATGTATT TGTCAGCATT
TTTGATAACG TTCCAGCGAT TGGCGGCTTT TTGTATGGGG CATTATACGC ACCGCTCGTT
GTTACGGGAA TGCATCATAC GTTTTTACCG GTCGATTTGC AGTTGATTGC AAGCACAGGT
GGTACGTTCT TATGGCCGAT CCTTGTCATG TCAAACGTTG CCCAAGGTTC TGCGGCATTA
GCAATGATGT TTGCTGCAAA GGATGAAAAG TTAAAAGGTC TTTCTTTCAC TTCCGCAGTA
TCTGCTTATC TTGGCATTAC CGAACCGGCG ATGTTTGGGG TAAACTTGCG TTTCCGTTAT
CCGTTCATTT CGGCGATGAC GGGTGCGGCG ATTGCCGGAA TGTTTATTAC ACTAAATAAA
GTCATCGCTC CATCGATTGG CGTTGGCGGT TTGCCAGGGT TTTTATCGAT CGTACCGCAA
AAGTGGGCAC CATTCTTTAT CGGAATGGCA ATCGCCATTA TCGTACCGTT TGCCTTAACG
TTTGTATTCA GCAAGTTCCG CAAAGAGAAT CGCTAA
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| Protein sequence | MGAYEQSVAK IVEAIGGKEN IVAATHCVTR LRFALKDEGK VDKEKLESID IVKGSFSANG
QFQVVIGQGL VDKVYNEMVE MTGIGRATKQ EIKDAAEAKL NPLQRAIKTL ADIFIPILPA
IVTAGLLMGI NNILTGPGIF YEGKSFVEVH KEWADLASMI NLIANTAFVF LPGLIGWSAV
TKFGGSPLLG IVLGLMLVHP DLLNAWGWGA AKEKGEIPIW NLFGFEVQKV GYQGQVLPVL
VASYVLAKIE QFLRKRIPDA FQLLLVAPLA LLITGFLAFI AIGPITFAIG NAITNVFVSI
FDNVPAIGGF LYGALYAPLV VTGMHHTFLP VDLQLIASTG GTFLWPILVM SNVAQGSAAL
AMMFAAKDEK LKGLSFTSAV SAYLGITEPA MFGVNLRFRY PFISAMTGAA IAGMFITLNK
VIAPSIGVGG LPGFLSIVPQ KWAPFFIGMA IAIIVPFALT FVFSKFRKEN R
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