| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1407 |
|---|
| Symbol | |
|---|
| ID | 7976861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1478674 |
|---|
| End bp | 1480803 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644798328 |
|---|
| Product | PTS modulated transcriptional regulator, MtlR family |
|---|
| Protein accession | YP_002949501 |
|---|
| Protein GI | 239826877 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3711] Transcriptional antiterminator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.126789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTTG ACAAGCGCAG TACTGCGATA TTATGCGAGT TGCTAAGGTG TGAAGATTAT
TTATCTATGC AGGAGTTGAC CAAAAGATTT AATATATCTC GGCGAACTGT CTATTACGAT
ATTGAGAAGA TTAACTATTG GTTGAAGAGC AATAATCTTG ATGAGGTGAA ATACGTTCGG
ACTTTAGGCT TTTATTTAAC TGAACAGGCG AAACACGCAG TTAGAGAAAA ACTAAAAAAT
TTAGAGAGCT GGCATTATCA ATATACTGCA AAAGAAAGGC AGGCGTGGCT TGCAATATAT
TTATTAGTAA AAGACCAGCA GCTTTTTCTT GAGGATTTAT CAGAAAAAAC AAGAGTAAGC
AGAAACACAA CGATCGAAGA TTTAAAGAAA TTACGTGCAC AGTTGAAAAG TTTCCAATTA
ACTCTTTATT TTAACCGGCA AACTGGTTAC TTAATAAAAG GTAAAGAAGA AAACAAACGA
AAAGCAATCG TATATTACTT ATCCCTTGTT ATTCCCAATC AACAAGACTG GCAAACGGTT
TTAGCTAATT TAAAGCGTTT GCTGCTCCCT GATAAAGACG AGCAAAATAT GGTCATTTTG
GCCGAGTTGA AATGTATACT CAACATCTTA AACGAATGCG AAAAGGATTT AAATATACAA
TTTGCCGATG ATGTTTTGCA TCATTTAGCC TTGCGTTTTT GGCTATTTGG AAAGCGAATT
GTCCAAGGAA AAAAGATCGA ATTTGACCCG ATTGAAAAAG AAGTGATTCA ACAAACAAGA
GAATTTGAAG CGGCCAAAAA AGCAAGCAAA AAATTGGAAT CCATCTTTCA AACTTCTATT
CCCGATGATG AAGTTTACTA TTTAGCTACC CATTTATTAA GTACTAAAGT TCAATATTTT
GGCAATACGA TTCAAGGTCA CGATGACTAC GGAAAACTAA AACATATTGT ACAAAAAATG
GTCACAGAAT TTCAAGCTTT TGCGTGTGTT ACATTTCCAA ACAGACAAGA GGTTGAAAAA
AATTTACTTT TACATTTAAA GCCTGCCTAT TACAGAATCA AATATGGGCT CCAAGTTGAA
AATCCACTTG TTGAGTTAAT AAAAACAAAA TATAAGGATC TTTTCTTAAT CACAAAAAAA
GTGATTCATC ATTTTGAAAC AGCTATCGGG AAAAAAGTTA GTGATGAGGA AACGGCATTA
ATTGCTTTAC ATTTTGGGGG GTGGTTGCGT AGGGAAGGGA TTCAACCAAA GGAACGGAAA
CGCGCTATTC TTATTTGTGC AAACGGCATC GGTACTTCAG CGATTTTACG GCAACAGTTG
GAAGGGTTAT TTTCAACTGT TGATTTTGTT GAAACTATTT CCGTAAGAGA CTATGAGAAA
AGGGACTTTC CTGATATTGA TTTTGCTGTC TCGACTGTTG CTGTTTCTAA GAAAAAACAT
CCAGTTTTCG TTGTGAATCC GATTTTAACG GATCAAGAAA AAGAAACACT ATTAAAAAAG
GTTCATGCTT TATTTGGTGA AAATGTATCG CAGAATGCAA AGTATTCTCC AGAAGCAATT
CTTGAAATCA TTAAGCAATA CGCAGATATA AAAGATGAAC AAGCGCTAAT TGCCGCATTA
AAAGAATATT TTTATAAGCC TTTTATTCCT AAAAACAGGG GACGAAAACC TAGTTTATTA
GAATTACTTT TACCGGAATA TATTCAAATT GCTGAGAAAG TAGAAAGTTG GGAACATGCT
ATAGAACTAG CTTCAAGGCC GCTTTTGCGA ACAGATAAGA TAACGGAGCA ATATGTTAAT
GCTATGATCA ATCATATTAA AAATTTAGGA CCTTACGTAA TCATTGCACC GAAAGTGGCT
CTTCCTCATG GAAAACCGGA TGAAGGGGTA AAAAAGATTG GAATGAGTTT ATTGGTGTTG
AAAGAGCCGG TTTCCTTTTC AGAAAAAAGA GAACACGATG TCCAACTAAT CTTTGTTTTA
GCATCTGTAG ATCAAGAAAC TCATCTTCAT GCATTATCAT CACTGTCGGA ATGTTTAGCG
TCATCTGAAT TCATTCATAC GTTAATTCGA TGTGATACGC CGGAAGAGAT ATGGTCGTAT
TTGAAAAGTG AAATTCCAGA AAATTATTAA
|
|---|
| Protein sequence | MSLDKRSTAI LCELLRCEDY LSMQELTKRF NISRRTVYYD IEKINYWLKS NNLDEVKYVR
TLGFYLTEQA KHAVREKLKN LESWHYQYTA KERQAWLAIY LLVKDQQLFL EDLSEKTRVS
RNTTIEDLKK LRAQLKSFQL TLYFNRQTGY LIKGKEENKR KAIVYYLSLV IPNQQDWQTV
LANLKRLLLP DKDEQNMVIL AELKCILNIL NECEKDLNIQ FADDVLHHLA LRFWLFGKRI
VQGKKIEFDP IEKEVIQQTR EFEAAKKASK KLESIFQTSI PDDEVYYLAT HLLSTKVQYF
GNTIQGHDDY GKLKHIVQKM VTEFQAFACV TFPNRQEVEK NLLLHLKPAY YRIKYGLQVE
NPLVELIKTK YKDLFLITKK VIHHFETAIG KKVSDEETAL IALHFGGWLR REGIQPKERK
RAILICANGI GTSAILRQQL EGLFSTVDFV ETISVRDYEK RDFPDIDFAV STVAVSKKKH
PVFVVNPILT DQEKETLLKK VHALFGENVS QNAKYSPEAI LEIIKQYADI KDEQALIAAL
KEYFYKPFIP KNRGRKPSLL ELLLPEYIQI AEKVESWEHA IELASRPLLR TDKITEQYVN
AMINHIKNLG PYVIIAPKVA LPHGKPDEGV KKIGMSLLVL KEPVSFSEKR EHDVQLIFVL
ASVDQETHLH ALSSLSECLA SSEFIHTLIR CDTPEEIWSY LKSEIPENY
|
|---|
| |