| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1399 |
|---|
| Symbol | |
|---|
| ID | 7976853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1469883 |
|---|
| End bp | 1470623 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644798321 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002949494 |
|---|
| Protein GI | 239826870 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.765734 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGT TAACAGTCGA TCAGCTGACG GTCGCTTATC AGCGCCAAGC GGTGTTAGAA
GACGTTTCTT TTTCCGTGCC GGAAGGGAAA TTGATTGGCA TTATCGGACC AAATGGAGCA
GGAAAATCAA CATTAATGAA GGCTATTTTA GATTTAATTC CGCGCGTGAA AGGCGATATC
GCTATTTATG GAAAAGCGTA TAAGCAACAA CGCCATCTTG TCGGCTATGT CCCGCAGCGC
GGTTCGGTTG ATTGGGATTT TCCGACGAAT GCGCTTGATG TGGTTCTCAT GGGACGATAC
GGTCACATTG GGCTATGGAA ACGCCCGCGC AAAGAAGATG TGGCGGTGGC GATGCAATGT
TTAGAAAAAG TCGGAATGAC CCCATATGCG AAACGGCAAA TTAGCCAACT TTCCGGCGGA
CAACAACAGC GCGTTTTTTT AGCGCGTGCA CTTGCACAAG ATGCATCGAT CTATTTAATG
GATGAACCGT TTGTCGGCGT TGATGCCGCA ACGGAAAAGG CGATCATCGA ATTATTAAAT
GAATTAAAAG CAAAAGGCAA AACGGTTCTT GTTGTTCATC ACGACTTGCA AACGGTGCGA
GATTATTTTG ACTGGGTGCT GCTTTTAAAC AAGCGAGTGA TCGCCGCTGG GCCGACGGAA
GAAGTATTTA CGTTTGAGAA TTTACAAAAA ACGTACGGCG GAAAGCTTGC GTTTCTTTCC
CCGCAACATG TCGTGAGGTG A
|
|---|
| Protein sequence | MKPLTVDQLT VAYQRQAVLE DVSFSVPEGK LIGIIGPNGA GKSTLMKAIL DLIPRVKGDI
AIYGKAYKQQ RHLVGYVPQR GSVDWDFPTN ALDVVLMGRY GHIGLWKRPR KEDVAVAMQC
LEKVGMTPYA KRQISQLSGG QQQRVFLARA LAQDASIYLM DEPFVGVDAA TEKAIIELLN
ELKAKGKTVL VVHHDLQTVR DYFDWVLLLN KRVIAAGPTE EVFTFENLQK TYGGKLAFLS
PQHVVR
|
|---|
| |