| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1393 |
|---|
| Symbol | |
|---|
| ID | 7978190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1463738 |
|---|
| End bp | 1464466 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644798316 |
|---|
| Product | Glycerophosphodiester phosphodiesterase |
|---|
| Protein accession | YP_002949489 |
|---|
| Protein GI | 239826865 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTT ATGCTCATCG AGGATTTAGC GGGAAATATC CAGAAAACAC AATGCTGGCG
TTTCAAAAAG CGTACGAAGT GGGTGCTGAC GGGATTGAAT TAGATGTGCA AATGACAAAA
GATGGGGAAA TTGTCGTCAT TCATGATGAA CGAGTCGACC GAACAACCAA TGGGATTGGT
TATGTAAAAG ACTTTCTTTA TAAACAACTT CGTTTGCTTG ATGCAGGAAG CTGGTTTCAT
GACCGTTTTG CCCGTCAACG CATTCCCGCC TTGATGGAGG TGTTGGAGTG GGTTCAAGAT
TTAGATAAGG AAATAATGAT TAATATTGAG CTGAAAAATA ATGCCATTGA TTATCCGCAT
TTAGAAGAAA AAGTGCTCAA AATGATTGGA CAATTTCAGT TGGAAAAACA GGTGATATTA
TCTTCTTTCA ACATATGTAG CATGCTAAAG GCACGGCGGC TTCATCCGGT GATTGAAATC
GGCACATTGT TTGAAGGAGT TAATGAAAGC GCAGTTCCAA GTGCAAAGTT GGTGAATGCG
CAAGCCATAC ATGGAGATTT GCCGTTTGTT TTATCTTCAG AAGGAAAAAA AGCGGCGGCC
CAAGGGATGA AATTGCGCGT TTATACGGTG AATGATGCAA AGGTAGCATC GATGTTGCGG
AATAAAGAAA TTTCAGCGCT AATGACAGAC TTTCCGAATG AATTTCTGGC GGAGAAGTGT
GAGTCATAA
|
|---|
| Protein sequence | MEIYAHRGFS GKYPENTMLA FQKAYEVGAD GIELDVQMTK DGEIVVIHDE RVDRTTNGIG
YVKDFLYKQL RLLDAGSWFH DRFARQRIPA LMEVLEWVQD LDKEIMINIE LKNNAIDYPH
LEEKVLKMIG QFQLEKQVIL SSFNICSMLK ARRLHPVIEI GTLFEGVNES AVPSAKLVNA
QAIHGDLPFV LSSEGKKAAA QGMKLRVYTV NDAKVASMLR NKEISALMTD FPNEFLAEKC
ES
|
|---|
| |