| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1347 |
|---|
| Symbol | gltD |
|---|
| ID | 7978150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1418500 |
|---|
| End bp | 1419981 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644798284 |
|---|
| Product | glutamate synthase subunit beta |
|---|
| Protein accession | YP_002949457 |
|---|
| Protein GI | 239826833 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAG CAACCGGCTT TATGGAATAT GCACGCGAGG AAGAAACAAA ACGTGACCCG
CTTTCCCGTC TCAACGATTG GAAAGAATAT GCGTTTCCGT TTTCCGATGA AACGCTTGCA
AGACAAGGCG CCCGCTGTAT GGATTGCGGG ACTCCGTTTT GTCATATGGG AATGGAATTG
AACGGGCTGA CATCGGGCTG CCCGATTCAT AATTTGATCC CGGAGTGGAA CGATTTAGTC
TACCGAGGCA GATGGAAAGA GGCGCTCGAG CGGTTGCTGA AAACGAACAA CTTCCCAGAA
TTTACCGGAA GAGTTTGTCC GGCGCCTTGT GAAGGTTCCT GTACGGTAGC GATTTCCGAC
CCGGCTGTCG CCATCAAAGG AATCGAGAGG GCGATTATTG ATAAAGGGTT TGCCGAAGGA
TGGATTCAGC CATGGATTCC GCAAAAACGA ACAGGAAAAA AAGTGGCGAT TGTCGGTTCT
GGGCCTGCCG GTCTTGCTTG CGCCGACCAA CTCAATCAAG CGGGCCATTC GGTAACGGTG
TACGAGCGGG CTGACCGAGT CGGCGGGTTA TTAATGTATG GCATTCCAAA TATGAAACTA
GAAAAAGAAA TTGTCGAGCG GAGAGTTCGG CTTTTAGAAC AAGAAGGGAT TACGTTCATA
ACCAATACGG AAGTTGGAAA AGACATCACC GCCGAAGAGC TGCGTTCTCA ATATGACGCC
ATCGTATTAT GCATCGGCGC GCAAAAACAT CGTGACCTTG CGATTGAAGG AAGAGAGCTT
GAGGGTGTTC ATTTTGCCAT GGATTATTTA ACAGGTGTGA CAAAAAGCTT GCTTGACTCG
AATTTTGCAG ACGGCGGCTT CATCGATGCG AAAGACAAGC ATGTCATTGT GATCGGCGGA
GGCGATACGG GCGCGGACTG TGTTGCCACT GCATTAAGGC AAGGGTGCAA AAGCGTTGTG
CAGTTTGGCA AGCACCCGGC ATTGCCGGAA CAACGATCGG AAAATAATCC ATGGCCGCAA
TATCCGCTTG TATTTACACT GGATTACGCC TATGAAGAAG CGAAAGCGAA ATTCGGTGCT
GACCCGCGGC AATATTGCAT TCAGACGAAA AAAATTGTTG GCGATGAGCA CGGGCGAGTC
AAAGAGCTTC ATACGATTCA AATGGAAAAA ATCATCGATG AAAACGGCAA AGCGATATTT
AAAGAGATTC CGGGCACCGA ACAAGTTTGG CCATGTGATT TAGTATTTAT CGCCATCGGC
TTTGAAGGTC CGGAGCAGCC GATTTTGCAG CAATTCGGCG TCGAGACCGT CAACAATAAA
GTTAAAGCGC CGTACGGTAA ATACACAACC AATGTCGAAG GAGTATTTGC GGCCGGAGAC
GCCCGTAGAG GCCAAAGCTT AATCGTTTGG GCGATTCACG AAGGCCGGGA AGCGGCAAGA
GAAGTCGATC GTTTCTTAAT GGGAACAACG AATTTGCCGT GA
|
|---|
| Protein sequence | MGKATGFMEY AREEETKRDP LSRLNDWKEY AFPFSDETLA RQGARCMDCG TPFCHMGMEL
NGLTSGCPIH NLIPEWNDLV YRGRWKEALE RLLKTNNFPE FTGRVCPAPC EGSCTVAISD
PAVAIKGIER AIIDKGFAEG WIQPWIPQKR TGKKVAIVGS GPAGLACADQ LNQAGHSVTV
YERADRVGGL LMYGIPNMKL EKEIVERRVR LLEQEGITFI TNTEVGKDIT AEELRSQYDA
IVLCIGAQKH RDLAIEGREL EGVHFAMDYL TGVTKSLLDS NFADGGFIDA KDKHVIVIGG
GDTGADCVAT ALRQGCKSVV QFGKHPALPE QRSENNPWPQ YPLVFTLDYA YEEAKAKFGA
DPRQYCIQTK KIVGDEHGRV KELHTIQMEK IIDENGKAIF KEIPGTEQVW PCDLVFIAIG
FEGPEQPILQ QFGVETVNNK VKAPYGKYTT NVEGVFAAGD ARRGQSLIVW AIHEGREAAR
EVDRFLMGTT NLP
|
|---|
| |