Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_1318 |
Symbol | |
ID | 7978123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 1381251 |
End bp | 1382864 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644798257 |
Product | transcriptional regulator, PucR family |
Protein accession | YP_002949430 |
Protein GI | 239826806 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG2508] Regulator of polyketide synthase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000441454 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTATGAAA ACTTCCAATT AACTGTTTCC GATATTTTGA AAAGGAAGCA TTTTGAACAT GTTCAAATTG CAGCTGGGCA TCAAGGTTTG AATCGCACGG TGAAATGGGT GCATGTTGTG GAAGTGACAA AAATTAATAG GCTATTGAAT GGAAAAGAAC TTATCTTATC CACTGGAGTA GGATGGAAGG AAAATAAATC GTTGTTTATA TCTTTTGTGC AACAACTAAT CGAATGTGAT GCATCTGGAT TATGTATTGA AATGGGAACT TATGCTTCTT CCATTCCACA AGAGATTATT GACTTAGCGA ACGAACACCG CTTTCCCATC ATTCTCTTTC TTAAAGAAGT CCCATTCGTC GAAATCACCC AGGATATTCA CACCTATTTA ATTAACCAGC ATTATCAAAT CATCTCCAAC CTAGAGTCCT ATTCACAAGA ATTGAACAAG AAATTGTTAT CGATTGATCA TTATGATGAG ATTTTAAAAT TTCTACATCG TTATTTAGGT CATCAAGTCA TTTTTCGGAT CAATGGAAAA AAGGTAGAGT TAGTACCGAA ATGTGTGAAA CAATCTAAAG AAGAACAGCA ATTGTTTGAT TCTGCACTTC ACCAACAGCA AAAGACAGCC ACTCAATCCA TCCGAATTTT CGGTAATGAA TATGCGGAAT TATCCATTAT TTCTATCGAT AAAGAAATTA GTGAATTTGA TCTTCTCATT TTGGATCGAA CGGCTACTGC TCTTGCCCAG CATTTATTGC GGGATTTATA TGTGGAGGAA AAAAAGCGGG CGCAAGAAAA TGAATGGTTA AAGAGTTGGT TAGAAGGAGA GCATACGAGT GAAGCTATTT TTGACTATTT AACAGACCAT GAAACAGAAT TAAAACCAAA AGGTGGATTT GTAAGTATTT GTAGATTCAA ATCATCCAAA CAGTACTCAA ACTTAGACAT TACTTATTTC AAATTATTGT TTCGAACTAT TTTTGAACAA CAGGGATTCT CCACATTTCC TGTTGATTTT CGTAATAGCG TTGTGTTTAT TATGGTGAAT AAGCGTGACA TAAAAACATG GAAAAATCGC ATGAAGATAG GAATTAAATA TTTGATGGAA TCTGATTTTG CGAATAAGAA AAGAATACCG AACTTCCTTA TAGGAGTTGG GAAGTTTGTG GAAAACATCT CCCAGATGGA CAAAAGCTAT CAAACTGCTT TAGAAACCAT TAAAATTCAA AATCAACTGG GAGAAAAAGC AAATAGCTAT TTTTACGAGG ACTTACATAT ATATCGTATT ATTTCGCTTA TTCATAAATA TAGCGACTTG CATGAGGTGG TAATGGAATA TTTGGAACCT GTTATTCAAT ATGACAAAAA GTATAATGGA AAGTTGATGG AAACATTAAA GGTTTATTTG GCATGCAACG GATCGAAAAA AGAAACGGCC AAAAGATTGT TTGTGGTTAG ACAAACACTT TATCATCGCA TCCAAAAATT GAAAAAATTA TTGGGCGACG ATTTTATGAA TCCGGAAAAA CGGTTAGCTA TTGAATTTAT GATCAAAGCA TACGAGTATT TAATGTCAAA TGACGAGTCC CAATATGTAC AAAATCATAA GTAA
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Protein sequence | MYENFQLTVS DILKRKHFEH VQIAAGHQGL NRTVKWVHVV EVTKINRLLN GKELILSTGV GWKENKSLFI SFVQQLIECD ASGLCIEMGT YASSIPQEII DLANEHRFPI ILFLKEVPFV EITQDIHTYL INQHYQIISN LESYSQELNK KLLSIDHYDE ILKFLHRYLG HQVIFRINGK KVELVPKCVK QSKEEQQLFD SALHQQQKTA TQSIRIFGNE YAELSIISID KEISEFDLLI LDRTATALAQ HLLRDLYVEE KKRAQENEWL KSWLEGEHTS EAIFDYLTDH ETELKPKGGF VSICRFKSSK QYSNLDITYF KLLFRTIFEQ QGFSTFPVDF RNSVVFIMVN KRDIKTWKNR MKIGIKYLME SDFANKKRIP NFLIGVGKFV ENISQMDKSY QTALETIKIQ NQLGEKANSY FYEDLHIYRI ISLIHKYSDL HEVVMEYLEP VIQYDKKYNG KLMETLKVYL ACNGSKKETA KRLFVVRQTL YHRIQKLKKL LGDDFMNPEK RLAIEFMIKA YEYLMSNDES QYVQNHK
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