| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1276 |
|---|
| Symbol | |
|---|
| ID | 7976057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | - |
|---|
| Start bp | 1325259 |
|---|
| End bp | 1326326 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644798221 |
|---|
| Product | membrane protein AbrB duplication |
|---|
| Protein accession | YP_002949394 |
|---|
| Protein GI | 239826770 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3180] Putative ammonia monooxygenase |
|---|
| TIGRFAM ID | [TIGR03082] membrane protein AbrB duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTGT TAGAAACATA TATCGTCGCA GGACTGACCG GTTTGCTGTT TTATCGTCTC
CATTCCCCAA TTCCATGGAT GCTCGGAGCC ATTACTGGAA TGCTTGTTTG GAAAACGGTC
ATCAAGCGCC CAGTAGCGGC GCCGAAAGCG TTGTCGAATA GTGGATTGAT TGTGTTAGGC
ACTTATTTTG GACTGTCGTT TACAAAAGAA ACGCTATTAA CGATTGCGCC ATATATTGTT
CCGTTTCTCG TTGCCACCGT ATTGCTAATT GTTATTAACA TTATAAACAG CATCGCGGTG
ACGAAATGGA CACATATTGA TAAAGTGACA AGTGTGTTTG CATCTGTTCC TGGCGGGCTG
TCGGAAATGG TTGCCGCAAG TGAGTCGTTG AACGCGAATA CTGCTTTAGT AACCATTTTC
CAAACGATTC GTTTATTAAC GGTCGTTTTT CTTGTGCCAA CGGTCGTTGT CCATTGGTTG
AGCGGAGATG CGTCGTCAGG GAGCACAACC GCTCAGGCGG CAGCTTCTTC TTTCGATGGT
CATTACACTT GGTTTTTGTT AAGTATTTTC GGTGCGCTTC TTTTACGAAA CATCATTCCG
GCAGCATACG TCGTTGGACC GCTTGCCGTA ACGGCAGTGA TGCATGTGGC CGGGGTGAAC
TTACCGCCAC TGCCTGTATG GTTGATTATT TTGGCGCAAA TTAGTGTCGG AATAAACATG
GGAGAACGCA TTACCTTAGA AGATATTAAG CTTGGCGGAA AATTTAGCTG GGTATATTTC
TTGCTTGCGT TAGTATTAAT TGCTCTATCG TTCGGATTCG GCTACGTATT TGCGGAATTA
ACCGATCTTC CGCTGTCGAC CGCGCTGTTG AGCCTCGCGC CAGGAGGACT TGTGGAAATG
GTATTAACGG CGCAAACGGT CGGAGGAGAT CCAGCGATTG TCAGCTCCTT GCAATTTGTA
CGTCTTCTTC TTGTCATTAT CGTCGTGCCG AACGTGTTGA AATGGGTGTT TCGAAAATTC
CCATATATCA CCGAAACGCC ATGGAAAAAC CGCTCTGTTC GAAACTAA
|
|---|
| Protein sequence | MKVLETYIVA GLTGLLFYRL HSPIPWMLGA ITGMLVWKTV IKRPVAAPKA LSNSGLIVLG
TYFGLSFTKE TLLTIAPYIV PFLVATVLLI VINIINSIAV TKWTHIDKVT SVFASVPGGL
SEMVAASESL NANTALVTIF QTIRLLTVVF LVPTVVVHWL SGDASSGSTT AQAAASSFDG
HYTWFLLSIF GALLLRNIIP AAYVVGPLAV TAVMHVAGVN LPPLPVWLII LAQISVGINM
GERITLEDIK LGGKFSWVYF LLALVLIALS FGFGYVFAEL TDLPLSTALL SLAPGGLVEM
VLTAQTVGGD PAIVSSLQFV RLLLVIIVVP NVLKWVFRKF PYITETPWKN RSVRN
|
|---|
| |