Gene GWCH70_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1223 
Symbolhfq 
ID7977694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1275797 
End bp1276021 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content37% 
IMG OID644798169 
ProductRNA-binding protein Hfq 
Protein accessionYP_002949342 
Protein GI239826718 
COG category[R] General function prediction only 
COG ID[COG1923] Uncharacterized host factor I protein 
TIGRFAM ID[TIGR02383] RNA chaperone Hfq 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000846944 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT CCATTAACAT TCAAGACCAG TTTTTAAATC AGTTGCGCAA AGATGGAACA 
CAAGTCACCG TATTTTTGCT AAATGGCTAT CAGCTAAAGG GTTACATCAA AGGGTTTGAC
AATTTTACCG TTTTGTTGGA AGTCCAAGGA AAGCAGCAGC TTATTTATAA GCATGCGATT
TCTACGTTCG CGCCGGAAAA AAACGTTCGG TTTGAAACAG AATAA
 
Protein sequence
MKNSINIQDQ FLNQLRKDGT QVTVFLLNGY QLKGYIKGFD NFTVLLEVQG KQQLIYKHAI 
STFAPEKNVR FETE