Gene GWCH70_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_1175 
Symbol 
ID7977651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp1225459 
End bp1226190 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content41% 
IMG OID644798128 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002949301 
Protein GI239826677 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.336656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATCA AGTCAGACAA CCGTCACCTA TATTTACAAG TGATTGATCG AATTAAGCGT 
GATATTGAAA CAGGCGTGTA TAAAGAAAAA CAAAAGCTCC CATCGGAATT TGAATTAGCG
AAACAACTAG GTGTCAGCCG TGCAACATTG CGTGAGGCAT TGCGTGTTTT AGAGGAAGAA
AACGTGATTA TTCGCCGGCA TGGTGTTGGA ACGTTCGTCA ATGCAAGACC GCTGTTTACA
TCGGGGATCG AGCAGTTAAG CAGCGTTACT GATATGATTC GGCAGGCAGG TCGAAAACCT
GGAACGATTT TTTTATCTTC TTCCATTCAA CAGCCGACGG AAGATGACAT CCGGAGATTT
CAATGTTCGG CGGACGATGA CATTCTTTTG ATTGAACGTG TCCGTACAGC TGACGGGGAG
CCTGTTGTAT ATTGTATAGA CAAAATTTTA TGTAAATATT TACCAAAAGG AATTTCCTAT
GAGCAAGAAT CCCTTTTTGA AAACTTACAC AATCAGGCGA ATCGCGATAT TGCTTATGCT
GTAGCTCGCA TTGAACCGCT CGGTTACCAT GAGAAAGTGT CGCCGATTTT GCAATGTGAG
CCAGAAACTG CGCTTCTTGT GTTAAAGCAA ATGCATTTTG ATAAAAATGA TGAGCCGATT
TTTTATTCCA TCAACTATTT CCGTTCTGAC AAAATCAGCT TTCATGTACT TCGAAAACGC
CTTAGTTTTT AA
 
Protein sequence
MSIKSDNRHL YLQVIDRIKR DIETGVYKEK QKLPSEFELA KQLGVSRATL REALRVLEEE 
NVIIRRHGVG TFVNARPLFT SGIEQLSSVT DMIRQAGRKP GTIFLSSSIQ QPTEDDIRRF
QCSADDDILL IERVRTADGE PVVYCIDKIL CKYLPKGISY EQESLFENLH NQANRDIAYA
VARIEPLGYH EKVSPILQCE PETALLVLKQ MHFDKNDEPI FYSINYFRSD KISFHVLRKR
LSF