| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1162 |
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| Symbol | |
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| ID | 7977640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 1211195 |
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| End bp | 1212160 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644798115 |
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| Product | sporulation protein, polysaccharide deacetylase family |
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| Protein accession | YP_002949288 |
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| Protein GI | 239826664 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB
[TIGR02873] probable sporulation protein, polysaccharide deacetylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00597989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACAGAA ATTATACCCG CTATTTATCG GTGGCGATTA TGTTTTTCTT TGTTTGGGGC
ATCATCAATC AGCCACCAGT GAGCCAATAT ATTACCGTTT TTTTGCAAAA AGAGAATATT
ATGGCTATGA AAGGAGCCGA TAAGCTCTAT GCAGAAATTG TAGAAAAAGC AAAACAGTAT
GAAATTCCCC CACAAGATGC GGTCATCGAT CGAGTATGGA AAGCAACGCC TGGTTATAAC
GGATTAAAAA TCGATGTGCA AGCTTCGTAT GAAAATATGA AAAAGGAAGG AAAGTTTGAT
GAACGGAAGC TTGTGTACAA ACAAGTTCCT CCACGTGTTC ATTTAGGAGA TTTGCCGCCA
GCACCGATTT ATCGGGGACA TCCGGATAAA CCGATGGTCG CATTTCTCAT CAATGTGGCA
TGGGGAAATG AGTATATTCC GAAAATGCTC GATATTTTAA AAAAGCATAA CGTGAAGGCA
ACGTTTTTTT TGGAAGGACG TTGGGTAAAA AATCATCCTG ATATGGCAAA AATGATTGTA
GATGCTGGTC ACGAAATAGG AAATCATTCA TATAGCCATC CTGACTTTAA GTCGCTAGAT
AATGAAAAAA TCCGCAAGGA ACTAGTCAAA ACGAACGAAA TCATCGAAGC GACAACCGGG
GTGAAATGCA AATGGTTTGC TCCTCCAAGC GGGAGCTATC GTGATGATGT CGTGAAAATC
GCCGCTGATT TAGATATGAA AACAATTATG TGGAGCGTCG ATACAATTGA TTGGCAAAAA
CCGTCTCCAT CTGTTATAGT GAGACGGGTA ATGTCCAAAG TTCATCCCGG TGCAATGATT
TTGATGCATC CAACGCTATC AACTGCCGAG GCGCTTGAGC CGCTTATTAT TTCGATTCAG
CAAAAAGAAT ATGAAATTGG TAATGTGTCT ACATTATTAG ACGAAAAGAG AATTGTACAA
AAATAG
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| Protein sequence | MNRNYTRYLS VAIMFFFVWG IINQPPVSQY ITVFLQKENI MAMKGADKLY AEIVEKAKQY
EIPPQDAVID RVWKATPGYN GLKIDVQASY ENMKKEGKFD ERKLVYKQVP PRVHLGDLPP
APIYRGHPDK PMVAFLINVA WGNEYIPKML DILKKHNVKA TFFLEGRWVK NHPDMAKMIV
DAGHEIGNHS YSHPDFKSLD NEKIRKELVK TNEIIEATTG VKCKWFAPPS GSYRDDVVKI
AADLDMKTIM WSVDTIDWQK PSPSVIVRRV MSKVHPGAMI LMHPTLSTAE ALEPLIISIQ
QKEYEIGNVS TLLDEKRIVQ K
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