| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1161 |
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| Symbol | |
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| ID | 7977639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 1208967 |
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| End bp | 1211105 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644798114 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_002949287 |
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| Protein GI | 239826663 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000184021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAAG AAAAACGCAT TTTTTCCATA GACTGGGCTG GACGGCCGCT TGTCGTGGAA
ATTGGCCAAT TAGCGAAACA AGCGAATGGA GCGGTATTAG TCCGTTATGG CGACACAGTG
GTATTAAACA CAGCAACGGC ATCAAAAGAA GCAAAAAACG TCGACTTTTT TCCACTAACG
GTCAACTATG AGGAGCGTCT TTATGCGGTT GGTAAAATTC CGGGAGGATT TATTAAGCGG
GAAGGACGTC CTAGTGAAAA AGCGATTTTA GCAAGCCGTT TAATTGACCG GCCAATTCGT
CCATTGTTTG CGGAAGGATT CCGCAATGAA GTGCAAATCG TTTCGATGGT CATGAGTGTA
GACCAAGATT GTTCTCCGGA AATGGCGGCG TTATTCGGTG CGTCACTTGC CTTAACGATT
TCGGATATTC CGTTTGAGGG ACCGATTGCC GGTGTTACAG TCGGCCGTGT GGATGGAGAG
TTTGTGATTA ATCCGACTGT CGAACAATCG GAAAAAAGCG ATATTCATCT TGTTGTTGCC
GGCACGAAAG ACGCGATTAA TATGGTCGAA GCTGGAGCGG ACGAAGTGCC GGAAGAAGTG
ATTTTAGAAG CGATTATGTT CGGACATGAA GAAGTAAAAC GGCTGATCGC TTTCCAAGAG
GAAATCGCCG CCCAAGTAGG CAAAGAAAAA ATGGAAGTAG TTCTTTATGA GCTTGATCCT
CAACTAGAAG CAGAAATTCG CCAACTGGCG GAAGAGGATA TTAAACGAGC TGTTCAAGTG
CCAGAAAAAT TGGCGCGTGA TGCAGCAATT GAGGAAGTAA AAGCTAGTGT CATCGCAAAA
TACGAAGAAC AAGAAGCAGA TGAAGAAACA TTAAAACAAG TAAATGAAAT TTTGCATAAA
CTTGTTAAAG AAGAAGTGCG GCGGCTTATT ACCGAAGAAA AAATACGTCC GGACGGCCGT
AAGATTGACG AAATTCGGCC TCTCTCCTCT GAAGTCGGCG TATTGCCGCG CACGCACGGT
TCAGGGCTGT TTACGCGCGG ACAGACGCAA GTGCTTAGTG TTTGTACGTT AGGAGCGCTT
GGCGATGTAC AAATATTGGA CGGGCTTGGT ATTGAAGAAA CGAAACGGTT TATGCACCAC
TATAACTTCC CGCCATTTTC GGTTGGCGAA ACAGGACCGA TGCGCGGTCC AGGCCGCCGT
GAAATTGGAC ACGGAGCGCT TGGAGAACGA GCGTTAGAAC CGGTCGTTCC ATCTGAAAAA
GAATTTCCAT ATACCATTCG CCTTGTTTCC GAAGTGCTAG AATCGAACGG TTCGACATCT
CAAGCTAGCA TTTGTGCAAG CACGCTCGCG ATGATGGATG CAGGTGTCCC GATTAAAGCA
CCGGTAGCGG GAATCGCGAT GGGACTTGTG AAAAACGATG ACAATTATAC GATTTTGACA
GATATTCAAG GCATTGAAGA CCATCTCGGA GATATGGATT TTAAAGTAGC GGGTACGGCA
AAAGGCGTCA CCGCTTTGCA GATGGATATT AAAATTAAAG GCTTATCTCG TGAAATATTA
GAAGAAGCGC TCCAGCAAGC GAAAAAAGGT CGTATGGAAA TTTTAGAACA TATGATGCAA
ACGATCCGCG AGCCGCGCAA AGAGTTGTCG AAATACGCTC CGAAAATTTT AACGATGCAA
ATTAATCCAG AAAAAATTCG CGAAGTCATC GGCCCAAGCG GAAAACAAAT TAATAAAATT
ATTGATGAAA CCGGCGTAAA AATTGATATC GAACAAGATG GAACAATTTT CATCTCGTCT
GTCAACGAAG CGATGAACCA AAAGGCGAAG CAGATTATCG AAGATATCGT TCGCGAAGTC
GAAGTCGGGC AAATTTATTT GGGTAAAGTG AAGCGCATTG AGAAATTTGG GGCATTTGTT
GAATTGTTCA ACGGCAAAGA CGGTCTCGTT CATATTTCCG AATTAGCAGA AGAGCGTGTC
GGAAGAGTGG AAGATGTCGT TTCGATCGGC GATGAAATTT TAGTAAAAGT AATGGAAATT
GATAAACAAG GACGCGTTAA TTTATCGCGA AAAGCAGTAT TGCGCGATAA AAAGGAAAAA
AAAGGCAAAC GTCCGGAACG GCATAGAATG AAGCCTTAG
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| Protein sequence | MEQEKRIFSI DWAGRPLVVE IGQLAKQANG AVLVRYGDTV VLNTATASKE AKNVDFFPLT
VNYEERLYAV GKIPGGFIKR EGRPSEKAIL ASRLIDRPIR PLFAEGFRNE VQIVSMVMSV
DQDCSPEMAA LFGASLALTI SDIPFEGPIA GVTVGRVDGE FVINPTVEQS EKSDIHLVVA
GTKDAINMVE AGADEVPEEV ILEAIMFGHE EVKRLIAFQE EIAAQVGKEK MEVVLYELDP
QLEAEIRQLA EEDIKRAVQV PEKLARDAAI EEVKASVIAK YEEQEADEET LKQVNEILHK
LVKEEVRRLI TEEKIRPDGR KIDEIRPLSS EVGVLPRTHG SGLFTRGQTQ VLSVCTLGAL
GDVQILDGLG IEETKRFMHH YNFPPFSVGE TGPMRGPGRR EIGHGALGER ALEPVVPSEK
EFPYTIRLVS EVLESNGSTS QASICASTLA MMDAGVPIKA PVAGIAMGLV KNDDNYTILT
DIQGIEDHLG DMDFKVAGTA KGVTALQMDI KIKGLSREIL EEALQQAKKG RMEILEHMMQ
TIREPRKELS KYAPKILTMQ INPEKIREVI GPSGKQINKI IDETGVKIDI EQDGTIFISS
VNEAMNQKAK QIIEDIVREV EVGQIYLGKV KRIEKFGAFV ELFNGKDGLV HISELAEERV
GRVEDVVSIG DEILVKVMEI DKQGRVNLSR KAVLRDKKEK KGKRPERHRM KP
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