| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1111 |
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| Symbol | fliF |
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| ID | 7977597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 1161869 |
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| End bp | 1163452 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644798064 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_002949237 |
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| Protein GI | 239826613 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.330038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA AATTAAAAGA ATGGCTGAGC CGATTCACCT TATTTTGGAA AGAGAGAACA
AAAAAACAAA AATGGATCGC CATTGCCAGC CTCGCTCTTT TCTTGCTTAT AACCGGCGTA
GCTATATATT TTGCGACAAG AACAGAGTTT GCGCCGTTAT ATAGCAACTT AACGCCACAG
GAAGCGGGGC AAATTAAAGC AACGCTCGAC CAGCGGGGAG TCAAATCGGA AGTAGCGGAT
AACGGCACCA CGATTAAAGT GCCAAAAGAG TTAGTAAACT CGTTAAAAGT TGATTTAGCG
GCAGAAGGAA TTCCAAACAG CGGCACCATT GATTATTCTT ATTTTGGAAA AAATGCAAGC
TTCGGAATGA CGGATAACGA GTTTAATGTT GTCAAACTCG AAGCAATGCA AAATGAGCTG
GCAAATTTAA TTAAAAGCAT CGATGGTGTA GAAGACGCAA AAGTAATGAT TAATCTTCCA
CAGCCGAGCG TGTTTGCTTC CGATGACCAA GGCGAGGCAT CGGCTTCGAT CGTGTTAAAA
ACAAAACCGG GATATCAATT TAGCGATCAG CAAATTAGGG CGTTGTACCA TCTTGTTTCT
AAAAGTGTTC CTAACCTTCC TACAGATAAT ATCGTCATTA TGAATCAGTT TTTTGAGTAT
TTTGATTTGA AAAATAACGA AAATTTTTCG ACAGGCACAA CGTTTGCCAC ACAGCAAGAA
ATTAAAAAAC AAATTGAACG AGATATTCAA CGGCAAGTAC AGCAAATGTT AGGAACAATG
ATGGGGCAGG ATAAAGTCGT TGTATCCGTA ACGGCTGATG TGGACTTTAC GCAGGAAAAC
CGGGAAGAAA ACCTTGTTGC TCCGGTTGAT GAAAAAAATA ACGAAGGCAT TGCCGTCAGC
GTGCAACGTA TTAAAGAGAC ATACTCTGGG AAAGGCGCGC AGCCGGGCGG CGTGGCCGGT
ACGGGAGAAA ACGAAGTGCC AAGCTATCAG GCTGGAGCAA GCGAGACAAA TGGAGATTAT
GAGCGAACCG AGGAAACGAT TAATAACGAA GTGAATAAGA TCAAAAAACA TATCGTCGAA
AGTCCATATA AAATTCGTGA TTTAGGCATT CAAGTAATGG TTGAGCCGCC AAATCCGAAA
AATCCAAACT CTTTGCCACA GCAAACGATC GACGATATTC AAAAAATATT AGGAACGATT
GTCAGAACAT CGATTAATAA GCAAGATGGC CAAACATTAA CCGATCAGGA TATTCAAAAT
CGCATCGTTG TTTCTGTTCA GAAATTTAAC GGAAAACCAA CATTTACGGA ACCAAAACAG
ACGATTCCAA TGTGGGTATA CATCGTCGGT GGAATTGGCC TTGTTCTTCT TATTGCATTG
CTCATCTTAT TGTGGCGCAG ACGTAAAGAG GAAGAAGAGG AAGAAGAGGA AGATATTCTG
GAGCCTATGG TTCAAGAAAT TCCAGATATC CATGAAGAGA ACGAAACGGA ATCGACGATG
CGCCGTAAGC AACTAGAAAA ATTAGCGAAA GAAAAGCCAG ACGAATTTGC AAAGCTGTTG
CGAACATGGC TATCGGAAGA GTAG
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| Protein sequence | MSNKLKEWLS RFTLFWKERT KKQKWIAIAS LALFLLITGV AIYFATRTEF APLYSNLTPQ
EAGQIKATLD QRGVKSEVAD NGTTIKVPKE LVNSLKVDLA AEGIPNSGTI DYSYFGKNAS
FGMTDNEFNV VKLEAMQNEL ANLIKSIDGV EDAKVMINLP QPSVFASDDQ GEASASIVLK
TKPGYQFSDQ QIRALYHLVS KSVPNLPTDN IVIMNQFFEY FDLKNNENFS TGTTFATQQE
IKKQIERDIQ RQVQQMLGTM MGQDKVVVSV TADVDFTQEN REENLVAPVD EKNNEGIAVS
VQRIKETYSG KGAQPGGVAG TGENEVPSYQ AGASETNGDY ERTEETINNE VNKIKKHIVE
SPYKIRDLGI QVMVEPPNPK NPNSLPQQTI DDIQKILGTI VRTSINKQDG QTLTDQDIQN
RIVVSVQKFN GKPTFTEPKQ TIPMWVYIVG GIGLVLLIAL LILLWRRRKE EEEEEEEDIL
EPMVQEIPDI HEENETESTM RRKQLEKLAK EKPDEFAKLL RTWLSEE
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