Gene GWCH70_1091 details

Gene Information

• Locus tag: GWCH70_1091
• Symbol: rimM
• ID: 7977579
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: +
• Start bp: 1143942
• End bp: 1144460
• Gene Length: 519 bp
• Protein Length: 172 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 644798044
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_002949217
• Protein GI: 239826593
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00000000000655231
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGT GGTTTAATGT CGGAAAAATT GTGAATACGC ATGGGATTCG TGGCGAAGTA 
CGTGTTATTT CCCGCACTGA TTTTCCAGAG GAACGTTATA AAAAAGGAAA TACGTTATAT 
ATTTTTATGG AGAAATCGAA AGAACCAGTC GCAGTAACCG TCAAAAGCCA TCGTGTTCAT 
AAATCATTTG ATTTGCTTGC GTTTGAAGGA TATGACAACA TTAATCTTGT CGAGAAGTTT 
AAAGGGGCGA TGTTGAAGGT GCCGGAGAGC CAGCTTGGCG AGTTAGATGA AGGAGAATAT 
TATTTCCATG AAATTATTGG CTGTACGGTC GTTACAGAAG AAGGGGAAAC GATCGGAACC 
GTGAAAGAAA TTTTAACTCC GGGCGCCAAC GATGTATGGG TGGTAAAACG GGATAACGGA 
AAAGAAGTGC TTATTCCATA TATAGAAGAC GTTGTAAAAA ATGTCGATGT AGAAACGAAA 
ACCATTACCA TTCGCCCAAT GGAAGGGCTG CTCGAATGA 

 

Protein sequence

MEKWFNVGKI VNTHGIRGEV RVISRTDFPE ERYKKGNTLY IFMEKSKEPV AVTVKSHRVH 
KSFDLLAFEG YDNINLVEKF KGAMLKVPES QLGELDEGEY YFHEIIGCTV VTEEGETIGT 
VKEILTPGAN DVWVVKRDNG KEVLIPYIED VVKNVDVETK TITIRPMEGL LE