| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1063 |
|---|
| Symbol | |
|---|
| ID | 7979188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1116997 |
|---|
| End bp | 1117953 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644798016 |
|---|
| Product | methionyl-tRNA formyltransferase |
|---|
| Protein accession | YP_002949189 |
|---|
| Protein GI | 239826565 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG TTGTGTTTAT GGGAACACCG GATTTTTCTG TTCCTATATT GAAGCAGCTA
ATAGAAGATG GCTATAACAT TGCTGCCGTC GTTACACAGC CGGATAAACC GAAAGGAAGA
AAGCGGGAGT TGACACCGCC GCCTGTCAAA GTGGAAGCGG AAAAACACGG AATTCCGGTA
TTGCAGCCGA CAAAAATTCG TGAAAAAGAA CAATATGAAC AAGTGTTGGC GTTCAAGCCA
GATTTAATTG TGACAGCGGC GTTTGGCCAA ATTTTGCCGA AAGCATTGCT CGATGCTCCG
AAATACGGCT GCATTAACGT CCATGCTTCA TTGCTTCCGG AATTGCGTGG CGGCGCTCCG
ATTCATTATG CGATTTTGCA AGGAAAGACA AAAACAGGCG TCACGATTAT GTATATGGTG
GAAAAGCTCG ATGCCGGCGA TATTTTAACA CAAGTGGAAG TACCGATTAC CGAAACCGAT
ACGGTTGGCA CGCTTCATGA TAAATTAAGC ATTGCTGGGG CAAAACTGTT ATCAGAAACG
ATTCCGCAAT TAGTAGCTGG AAAATTAACT CCAATCAAAC AAGACGATGA AAAAGCAACA
TATGCGTATA ATATTAAACG CGAACAAGAA AAGATTGATT GGACAAAGCC GGGAGAAGAC
ATTTATAACC ATATACGCGG CTTGCACCCG TGGCCAGTTG CATATACAAC GTTTGCCGGA
AATGTATGGA AGGTTTGGTG GGGAGAAAAA GTTCCGGCTC CGAAAAAAGC AGAACCCGGA
ACGATTATTG ATATCGTACA GGATGGAATT GTTGTTGCGA CCGGCAATGA AACGGCAATT
AAAATTACAG AATTGCAGCC GGCGGGGAAA AAACGGATGA ATGCGGCGCA ATTTTTGCGC
GGCGCCGGCG CCCATCTCAC TATTGGAATG AAGCTAGGAG ATGAACATGA AAGCTAA
|
|---|
| Protein sequence | MIKVVFMGTP DFSVPILKQL IEDGYNIAAV VTQPDKPKGR KRELTPPPVK VEAEKHGIPV
LQPTKIREKE QYEQVLAFKP DLIVTAAFGQ ILPKALLDAP KYGCINVHAS LLPELRGGAP
IHYAILQGKT KTGVTIMYMV EKLDAGDILT QVEVPITETD TVGTLHDKLS IAGAKLLSET
IPQLVAGKLT PIKQDDEKAT YAYNIKREQE KIDWTKPGED IYNHIRGLHP WPVAYTTFAG
NVWKVWWGEK VPAPKKAEPG TIIDIVQDGI VVATGNETAI KITELQPAGK KRMNAAQFLR
GAGAHLTIGM KLGDEHES
|
|---|
| |