| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1061 |
|---|
| Symbol | |
|---|
| ID | 7976841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1114083 |
|---|
| End bp | 1116497 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644798014 |
|---|
| Product | primosome assembly protein PriA |
|---|
| Protein accession | YP_002949187 |
|---|
| Protein GI | 239826563 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.964371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAG CAGCGGTTAT TGTAGATGTT CCTTCGCGTC AGACGGATCG GCCTTTTGAT
TATGCCATCC CAAAAAAATG GGAAGATGTA TTGCAGCCAG GCATGCGTGT CACCGTTCCG
TTCGGTCCGC GGCGATTGCA AGGGTTTGTG ATCGATATTA AGTCTCACTC GGACGTAAAA
ACATTGAAAC CGATTGAAGA AGTGTTAGAT GTCACCCCTG TATTAAACGA AGAGCTGCTC
GAGTTAGGGA AATATTTAAC AGAAACGACG CTTTGTTTTG CGATTTCCGC TTACCAAGCG
ATGCTTCCGG CAGCGATGAA AGCAAAATAT GAAAAGGAAA TCCGGCTCGT TCGTACAGAA
AATCGCTTTT TACTGCCAGA AGCGATTCAG CCGCTTTTTG TGGATCGCAC TGCCATTGAT
TGGAAAGAAG TGGAGCATAG CGATCTGCTT TGGCCGTTGC AAAAGGCGAT TCAACAAGGC
CATTTAGAAG TCGTATACCA TGTAAAAGAA AAAGCAACAG CAAAAACGGT GAAGTACGTG
GAACTGGCGC AATCGCATGA AGAAATCGCG CGTGCCATTA ACGCATTGCC GGCAAACGCC
GCCAAGCAAA AACAGTTGTT AACGGTTCTT CTGTCTGCGG ATGAAGCAAT GCCGTTGAAG
CAGCTGTTAG AGCAGACCGA TGCTTCCTAT GCTTCGCTGA AAGCGTTGAC CGCAAAAGGA
CTCGTTGTAG AAAAAGAAAT CGAAGTATAT CGCGATCCAT ATGAGCATCG TTCGTTTTCA
AAAACAGCGC CGCTTCCGCT TACCGATGAG CAAGAAAAAG CACTTTCCGC CATTGTTGAG
CGCGTAAGAG CCAATGAGCA TGAGGTGTTT TTGCTATACG GCGTGACGGG AAGCGGAAAA
ACAGAAGTTT ACATGCAAGC GATTGAAGAA GTATTGCGGC AAGGAAAAGA AGCGATTGTT
CTTGTTCCAG AAATTTCGCT GACGCCGCAA ATGGTCGAAC GGTTTAAAGG GCGTTTCGGT
TCACAAGTGG CAGTGCTTCA TAGCGGCTTG TCTGTCGGTG AAAAATATGA TGAATGGCGA
AAAATTCATC GGAAAGAAGT GCAGCTTGTC GTCGGCGCCC GTTCTGCTAT TTTCGCTCCG
TTTGAAAATC TCGGCATGAT TATTATTGAT GAAGAACATG AGACAAGTTA CAAACAAGAA
GAAAATCCGC GTTATCACGC CCGTGATGTG GCGATTTACC GCGCCCGCGT CCACGGATGT
CCTGTCGTAC TCGGCAGCGC TACTCCTTCG CTCGAATCGT TTGCGCGGGC GAAAAAAGGG
GTATATCAGT TACTGACATT ACAAAAGCGG GTAAGCGATA ATGGGATGCC GGACGTTCAT
GTTGTAGATA TGCGGGAAGA ACTGCGGAGC GGAAACCGTT CGATGTTTTC GCGCTCGTTA
TTTGAGAAGT TGAAAGACCG TCTTCATAAA GGAGAACAAT CTGTATTGTT TTTAAATCGG
CGCGGCTACT CGACATTTGT TATGTGCCGT GATTGCGGTT ATGTGATTCG TTGTCCACAT
TGTGATATTT CATTGACGTA TCATCGGGTC GAGCAGCGAT TAAAATGCCA TTATTGCGGG
CACGAGGAGC CGATTACGTA TCGCTGTCCA TCATGCGGAA GTGAGCATAT TCGCTTTTTT
GGAACGGGAA CGCAAAAAGT GGAAGAAGAA TTGACGAAAC TGCTTCCCGA AGCGCGCGTG
ATCCGCATGG ATGTCGACAC AACGAGCCGC AAAGGCGCCC ACGAACGGCT GCTTGCTGAG
TTTGGCGCAG GGAAGGCCGA TATTTTGCTT GGCACACAAA TGATTGCCAA AGGTCTTGAT
TTTCCAAAAG TAACGCTTGT CGGCGTGTTG GCCGCAGATA CGATGCTCCA TCTTCCTGAT
TTTCGCGCTT CAGAAAAAAC ATTTCAGCTG TTGACACAAG TAAGCGGGCG CGCTGGGCGC
CACGAGCTTC CCGGCGAAGT CGTCATCCAA ACGTATACGC CGGAGCATTA CAGCATCACG
CTTGCCGCTA AACACGATTA TGATGCATTT TATCAAAGAG AAATGGTGCT TCGTAAAATG
TACGGCTACC CACCATTTTA CTATTTGACA TTAATCACCG TATCACATCC GGAAATAACG
AAAGCGGTGG CTGTGACAGA AAAGATTGCG GCATATTTGC GGGCACAGCT GTCGAATGAA
GCGATCATTC TTGGCCCTGT CGCTTCACCG ATTGCTCGAC TTCATGATAG ATATCGCTAT
CAATGCATGA TAAAATACAA ACGGGTGCCG AACATGACAC GGGTATTAAA AGCGGTTATC
GATCGTTATC AGCACGATGT TTCCCAAGGA GATTTATCGA TTACGATCGA TACGAACCCA
TATACAATGA TGTAA
|
|---|
| Protein sequence | MKVAAVIVDV PSRQTDRPFD YAIPKKWEDV LQPGMRVTVP FGPRRLQGFV IDIKSHSDVK
TLKPIEEVLD VTPVLNEELL ELGKYLTETT LCFAISAYQA MLPAAMKAKY EKEIRLVRTE
NRFLLPEAIQ PLFVDRTAID WKEVEHSDLL WPLQKAIQQG HLEVVYHVKE KATAKTVKYV
ELAQSHEEIA RAINALPANA AKQKQLLTVL LSADEAMPLK QLLEQTDASY ASLKALTAKG
LVVEKEIEVY RDPYEHRSFS KTAPLPLTDE QEKALSAIVE RVRANEHEVF LLYGVTGSGK
TEVYMQAIEE VLRQGKEAIV LVPEISLTPQ MVERFKGRFG SQVAVLHSGL SVGEKYDEWR
KIHRKEVQLV VGARSAIFAP FENLGMIIID EEHETSYKQE ENPRYHARDV AIYRARVHGC
PVVLGSATPS LESFARAKKG VYQLLTLQKR VSDNGMPDVH VVDMREELRS GNRSMFSRSL
FEKLKDRLHK GEQSVLFLNR RGYSTFVMCR DCGYVIRCPH CDISLTYHRV EQRLKCHYCG
HEEPITYRCP SCGSEHIRFF GTGTQKVEEE LTKLLPEARV IRMDVDTTSR KGAHERLLAE
FGAGKADILL GTQMIAKGLD FPKVTLVGVL AADTMLHLPD FRASEKTFQL LTQVSGRAGR
HELPGEVVIQ TYTPEHYSIT LAAKHDYDAF YQREMVLRKM YGYPPFYYLT LITVSHPEIT
KAVAVTEKIA AYLRAQLSNE AIILGPVASP IARLHDRYRY QCMIKYKRVP NMTRVLKAVI
DRYQHDVSQG DLSITIDTNP YTMM
|
|---|
| |