| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_1002 |
|---|
| Symbol | |
|---|
| ID | 7976789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1051855 |
|---|
| End bp | 1052676 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644797955 |
|---|
| Product | Patatin |
|---|
| Protein accession | YP_002949128 |
|---|
| Protein GI | 239826504 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.687933 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG GTGGTCATGT AGAGAGGAGA GAAACGGTGT TTCCGAAAAT TGGGTTAGCG
CTAGGTTCTG GAGGGGCGAG AGGTTTCGCG CATCTTGGAG TACTGAAAGT ATTGGAAGAG
GAGAAAATCC CAATTTCCTA CATAGCCGGA AGCAGCATCG GGGCGCTTGT CGCTGCTCTA
TATGCTAGCG GTCTCGGTCT TGAGCGTTTA TATAAGTTAG CAAAGTCGTT TCGTCGAAAT
GACTACATCG ATTTTACAAT TCCAAAAATG GGGCTAATTG CTGGAAAGCG AATTACCGAA
TTTATTCGGC TTCTCACAAA AGGGAAAAAA ATTGAGGAAC TGTCCATCCC GGTGGCAATT
GTAGCAACGG ATTTACAGAC AGGTCAAAAA GTGGTGTTTC GCCAAGGGGA TGTTGCCCGC
GCCGTACGAG CCAGCATTTC CATTCCCGGT ATTTTTGTCC CTGAAAGGGT AGACGGGCGA
TTGCTTGTAG ATGGAGGAGT TGTTGATCGC GTTCCCGTTT CCGTTGTCCG AGAAATGGGT
GCGGATATTG TTATTGCAGT CGATGTTTCC CATGTGAAAG TGGACGGAGA AATTACGTCG
ATATTTGATG TGATTTTACA AAGCATTGAT ATTCTGCAAG ACGAGCTTGT CCGCCATCGT
CAACTTGCCT CCGATGTGAT GATTCGGCCG CACGTAGAGC AATATAGCTC GCGAGCATTT
ACTCATGCAC AGGAAATTAT TGCTATCGGG GAACAGGAAA CACGCAAATA TGTGCCAGAA
ATCCGCCAAG CAATTCAAAA CTGGAAGGAG CATTCACGCT GA
|
|---|
| Protein sequence | MKQGGHVERR ETVFPKIGLA LGSGGARGFA HLGVLKVLEE EKIPISYIAG SSIGALVAAL
YASGLGLERL YKLAKSFRRN DYIDFTIPKM GLIAGKRITE FIRLLTKGKK IEELSIPVAI
VATDLQTGQK VVFRQGDVAR AVRASISIPG IFVPERVDGR LLVDGGVVDR VPVSVVREMG
ADIVIAVDVS HVKVDGEITS IFDVILQSID ILQDELVRHR QLASDVMIRP HVEQYSSRAF
THAQEIIAIG EQETRKYVPE IRQAIQNWKE HSR
|
|---|
| |