| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0984 |
|---|
| Symbol | |
|---|
| ID | 7976704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 1039705 |
|---|
| End bp | 1041564 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644797938 |
|---|
| Product | cytochrome c oxidase, subunit I |
|---|
| Protein accession | YP_002949111 |
|---|
| Protein GI | 239826487 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTACAG CAGTTCGTAA AAAGAGCCTA ATATGGGACT ACCTTACAAC GGTCGACCAT
AAAAAAATTG CCATCCTTTA CTTAATTGCC GGCGGTATTT TCTTCATCAT GGGTGGTATC
GAGGCTCTAA TTATTCGTAT TCAGCTTGCG GTGCCTAACA ACGATTTTGT TAGCGCGGGT
CTTTTTAATG AAATGATTAC GATGCATGGT ACGACCATGA TTTTCTTGGC AGCAACACCG
TTATTATTCG CATTGATGAA TGCGATTGTT CCAATTCAGA TCGGTGCGCG CGATGTTGCG
TTTCCGTTCT TAAACGCATT AGGCTTTTGG TTATTCTTTT TCGGGGGGCT TTTTCTAAAC
TGTTCTTGGT TTTTAGGCGG AGCGCCTGAT GCAGGATGGA CGTCTTACGC TTCGTTATCA
TTAGAATCAC CAGGACACGG AATTGACTTT TACGTATTAG GTTTACAAGT TTCCGGGTTC
GGTACATTAA TCAGTGGGAT TAACTTCATC GTAACCATCA TTACGATGCG TGCTCCAGGC
ATGACATACA TGCGTATGCC GTTGTTTACG TGGGCAACAT TCGTTGCTTC TGCGTTAATC
TTATTTGCGT TCCCGGCGCT AACGGCTGGA TTGCTTTTAT TGATGATGGA CCGTTTATTT
GGCGGCAACT TCTTTAATGC GGCATTAGGC GGCAACACGA TTATTTATGA ACACTTATTC
TGGATTTTCG GTCACCCGGA AGTATATCTC TTGATACTAC CATCGTTTGG TATTTTTTCT
GAAATTATTT CAACTTTCTC TAAGAAACGC TTATTTGGAT ATTCTTCCAT GGTGTTTGCG
ATTGTATTGA TCGGCTTTTT AGGATTCATG GTATGGGCGC ACCATATGTT TACAGTTGGC
ATGGGACCGG TTGCGAACGC CATTTTTGCG GTTGCGACAA TGACAATTGC TGTCCCGACA
GGTATTAAAA TCTTTAACTG GCTATTTACA ATGTGGGGTG GAAGCATCCG CGTTACAACG
CCAATGTTAT ATGCTATTGG TTTTATTCCT TCTTTCGTTA TCGGCGGAGT AACCGGGGTT
ATGCAGGCAG TAGCGCCGGC TGACTATCAA TATCATGACA GCTACTTCAT TGTTGCTCAC
TTCCACTATG TCATTGTTGG CGGTGTAGTG CTAGCTTTAT TAGGCGGCAC GCATTATTGG
TGGCCAAAAA TGTTTGGCAA AATGCTAAGC GAAAAGCTTG GTAAGTTGAC ATTTGTGTTA
TTCTTTACCG GATTCCATTT AACATTCTTT ATCCAACACT TCCTTGGCTT GATGGGTATG
CCTCGCCGCG TATTTACATT CTTGCCGGGC CAAGGTTTGG AAACTGGAAA CTTGATTAGT
ACAATTGGTG CCTTATTGAT GGCGGCAGGT GTTATCGTCC TTTTAATCAA TATCGTGATC
ACTACATTCA AAGGAGAAAA AGCTGAAGCG GATGCTTGGG GACTCGGGCG TACGCTTGAG
TGGGCGGTTC CTTCGCCAGC ACCTGAATAC AACTTTGCGC AAACTCCGCT TGTCCGTGGT
TTAGATGCTT ACTGGCTAGA GAAAATGGAA GGGAAAAAGG GCTTGACTCC GGCAGAACCG
CTTGGAGACA TCCATATGCC GAATCCTTCA TTCCTGCCGT TTGTCATTTC ACTTGGGCTG
TTTATCGCTT CATTTGGTTT CATGTATCAT AACGACTACT CTTGGGGGTT GCCGGTAGGA
ATTCTTGGAT TGGTCATTAC CTTTGGTTCT ATGTTCTTAC GTTCGATCAT TGATGATCAT
GGTTTCCACA TTCATAAAGA AGATATTATC GAAGCGGAGA AAAAGGGGGT TAAGGCATAA
|
|---|
| Protein sequence | MSTAVRKKSL IWDYLTTVDH KKIAILYLIA GGIFFIMGGI EALIIRIQLA VPNNDFVSAG
LFNEMITMHG TTMIFLAATP LLFALMNAIV PIQIGARDVA FPFLNALGFW LFFFGGLFLN
CSWFLGGAPD AGWTSYASLS LESPGHGIDF YVLGLQVSGF GTLISGINFI VTIITMRAPG
MTYMRMPLFT WATFVASALI LFAFPALTAG LLLLMMDRLF GGNFFNAALG GNTIIYEHLF
WIFGHPEVYL LILPSFGIFS EIISTFSKKR LFGYSSMVFA IVLIGFLGFM VWAHHMFTVG
MGPVANAIFA VATMTIAVPT GIKIFNWLFT MWGGSIRVTT PMLYAIGFIP SFVIGGVTGV
MQAVAPADYQ YHDSYFIVAH FHYVIVGGVV LALLGGTHYW WPKMFGKMLS EKLGKLTFVL
FFTGFHLTFF IQHFLGLMGM PRRVFTFLPG QGLETGNLIS TIGALLMAAG VIVLLINIVI
TTFKGEKAEA DAWGLGRTLE WAVPSPAPEY NFAQTPLVRG LDAYWLEKME GKKGLTPAEP
LGDIHMPNPS FLPFVISLGL FIASFGFMYH NDYSWGLPVG ILGLVITFGS MFLRSIIDDH
GFHIHKEDII EAEKKGVKA
|
|---|
| |