Gene GWCH70_0950 details

Gene Information

• Locus tag: GWCH70_0950
• Symbol: def
• ID: 7976673
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: -
• Start bp: 1008388
• End bp: 1008942
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 644797906
• Product: peptide deformylase
• Protein accession: YP_002949079
• Protein GI: 239826455
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000414865
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTACCA TGAAAGATAT TATTAAAGAA GGGCATCCAA CGCTACGAAA AGTGGCTGAA 
CCTGTTTCTC TTCCTCCATC AGAAGAAGAC AAACAAGTTT TACAAAGCCT TCTTGATTAT 
GTAAAAATGA GCCAAAACCC TGAGCTTGCT GAAAAATATG GATTACGCCC GGGAATTGGG 
CTGGCAGCTC CACAAATTAA TGTATCAAAA CGAATGATTG CCGTCCATGT AACGGATGAA 
AAAGGTACTT TATATAGCTA TGCGTTATTT AATCCAAAAA TTGTGAGCCA TTCTGTTCAG 
CAATGTTATT TAACGAGCGG AGAAGGATGT TTATCTGTCG ATCGGAACGT TCCAGGATAT 
GTGCCGCGCT ATGCCCGCAT TACCGTAACA GGGACAACGC TTGAAGGTAA AGAAGTAACA 
CTTCGGTTAA AAGGGTTGCC TGCCATTGTA TTTCAACACG AAATCGACCA CTTAAACGGC 
ATCATGTTTT ATGATCATAT TGATCCAAAA AATCCGTTTA AAGTACCTGA CAACGCGATC 
CCTATCGAAC GATAA 

 

Protein sequence

MITMKDIIKE GHPTLRKVAE PVSLPPSEED KQVLQSLLDY VKMSQNPELA EKYGLRPGIG 
LAAPQINVSK RMIAVHVTDE KGTLYSYALF NPKIVSHSVQ QCYLTSGEGC LSVDRNVPGY 
VPRYARITVT GTTLEGKEVT LRLKGLPAIV FQHEIDHLNG IMFYDHIDPK NPFKVPDNAI 
PIER