Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0852 |
Symbol | mtnB |
ID | 7977859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 917008 |
End bp | 917649 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644797825 |
Product | methylthioribulose-1-phosphate dehydratase |
Protein accession | YP_002948998 |
Protein GI | 239826374 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR03328] methylthioribulose-1-phosphate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.269604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTAC TTGTGAAGAG ATGGAAAGAG CTTGCCGAGA TAAAAGCAGA ATTGGCGGCG CGCGATTGGT TTTTCGCCAC AAGCGGAAAC TTGTCGATCA AGGTAACCGA TGACCCGCTC ACTTTTTTAG TCACGGCAAG CGGCAAAGAC AAACGCAAGC AGACAGACGA AGATTTTTTG CTTGTCGACG CTTCTGGAAA TCCAGTGGAG AATACGCATT TAAAGCCGTC TGCCGAAACG CTTTTGCATG TGGAAATTTA CAAGAAAACG AACGCGGGCT GCAGCCTCCA CGTCCATACG ATCGACAATA ATGTTATCTC CGAATTGTAC GGAGATGAGG GAGAAGTTGC GTTTTCCGGC CAGGAAATTA TTAAAGCGTT TGGGATTTGG GAAGAAGATG CGGTCATCCG CATTCCGATT ATTCCGAATT ACGCGCATAT TCCAACGCTT GCGAAGGAAT TTGCCAAGCA TGTAAACGGC GACGCCGGCG CGGTATTGAT CCGCAACCAT GGCATCACCG TATGGGGAAG AGACGCGTTT GAGGCAAAGA AGTTTTTAGA AGCATGGGAG TTTTTATTCA GCTGGCACGT CAAGTGGCTG CTGCTAAAGC AGACCGCCGT GCTGCCGGTT GTTAAACCAT AA
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Protein sequence | MSLLVKRWKE LAEIKAELAA RDWFFATSGN LSIKVTDDPL TFLVTASGKD KRKQTDEDFL LVDASGNPVE NTHLKPSAET LLHVEIYKKT NAGCSLHVHT IDNNVISELY GDEGEVAFSG QEIIKAFGIW EEDAVIRIPI IPNYAHIPTL AKEFAKHVNG DAGAVLIRNH GITVWGRDAF EAKKFLEAWE FLFSWHVKWL LLKQTAVLPV VKP
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