Gene GWCH70_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_0852 
SymbolmtnB 
ID7977859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp917008 
End bp917649 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content48% 
IMG OID644797825 
Productmethylthioribulose-1-phosphate dehydratase 
Protein accessionYP_002948998 
Protein GI239826374 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR03328] methylthioribulose-1-phosphate dehydratase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.269604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAC TTGTGAAGAG ATGGAAAGAG CTTGCCGAGA TAAAAGCAGA ATTGGCGGCG 
CGCGATTGGT TTTTCGCCAC AAGCGGAAAC TTGTCGATCA AGGTAACCGA TGACCCGCTC
ACTTTTTTAG TCACGGCAAG CGGCAAAGAC AAACGCAAGC AGACAGACGA AGATTTTTTG
CTTGTCGACG CTTCTGGAAA TCCAGTGGAG AATACGCATT TAAAGCCGTC TGCCGAAACG
CTTTTGCATG TGGAAATTTA CAAGAAAACG AACGCGGGCT GCAGCCTCCA CGTCCATACG
ATCGACAATA ATGTTATCTC CGAATTGTAC GGAGATGAGG GAGAAGTTGC GTTTTCCGGC
CAGGAAATTA TTAAAGCGTT TGGGATTTGG GAAGAAGATG CGGTCATCCG CATTCCGATT
ATTCCGAATT ACGCGCATAT TCCAACGCTT GCGAAGGAAT TTGCCAAGCA TGTAAACGGC
GACGCCGGCG CGGTATTGAT CCGCAACCAT GGCATCACCG TATGGGGAAG AGACGCGTTT
GAGGCAAAGA AGTTTTTAGA AGCATGGGAG TTTTTATTCA GCTGGCACGT CAAGTGGCTG
CTGCTAAAGC AGACCGCCGT GCTGCCGGTT GTTAAACCAT AA
 
Protein sequence
MSLLVKRWKE LAEIKAELAA RDWFFATSGN LSIKVTDDPL TFLVTASGKD KRKQTDEDFL 
LVDASGNPVE NTHLKPSAET LLHVEIYKKT NAGCSLHVHT IDNNVISELY GDEGEVAFSG
QEIIKAFGIW EEDAVIRIPI IPNYAHIPTL AKEFAKHVNG DAGAVLIRNH GITVWGRDAF
EAKKFLEAWE FLFSWHVKWL LLKQTAVLPV VKP