| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0702 |
|---|
| Symbol | |
|---|
| ID | 7978880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 775391 |
|---|
| End bp | 776734 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644797686 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002948860 |
|---|
| Protein GI | 239826236 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCAA CACCCAATTT AGTTGCAGAA CCAGAACGCC GCCAAACCAA GAAAGCAAGT
ACAGCCGCGG TATTATCCTT CCTTTTTATG GGTCTGGGAC AAATTTATAA TCGGCAGTAC
ATCAAAGGAA TTTTATATGC TCTGGTAGAA ATATATGTAA TTGTTTTTTT GACAAACCCG
ATTGTGAACG GTTTATGGGG CTTGATCACC TTAGGTGAGC AAGCTCAGGT TCGAAGAAGG
GGAAGGGTAG TCATAGAAGG AGATCATTCC ATCTTCTTGA TGATAGAGGG ATTGATAATT
GTTATAGTCC TTGTTATTTT CCTGTTATTT TATATCTATA ATATTCGTGA TGCCTATAAA
ACAGGCAAAC TTCACGAGAC CGGAGAAAAA GTAAACAGTT TTATAGAATC ATTGAAAAAA
TCATGGGAGT ATGGATATGC TTACATTCTT TTGACTCCTG CTGCAATCTT TACTCTCTTT
CTTTCCGTTC TTCCATTGAC TTTTGGTATT CTGATTGCAT TTACTAACTT TTCTTCCCCC
AATCATTTGC CTCCAAAAAA CCTAGTGGAT TGGGTGGGGT TCCAGAATTT TATTGATTTA
TTTAGATTAC AAGCATGGAG CAAGACATTT TATGGGATAG CGACTTGGAA CATCATATGG
GCTATTCTAG CTACTTTCAC CACGTTTTTT GTGGGGATGT TCTTTGCTTT AATTATTAAT
CATAATAAAG TTCGCCTGAA ACGAATGTGG AGAACAATAT TCATATTGCC CTGGGCTGTT
CCCCAATTTA TTTCTATCCT TGTTTTTCGA AATATTTTCA ACGGTCAATT CGGTCCTTTG
AACCAGTATT TATCCACTTT AGGAATTGAT CCTATTCCTT GGCTGTCCGA TCCATTTTGG
GCAAAAGTAG CTCTAGTGAC CATAAATATT TGGTTGGGAT TCCCGTTCTG GATGGCATTA
ATTGCAGGTG TGTTGACGAA TATTGACAAG GAATTATACG AAGCGGCAGA AGTAGACGGA
GCAAGCACAT TTCAAAAATT TCGCTCAATT ACTTTTCCTT TATTAATGTA CTATACTTCT
CCACTTTTAA TCATGAGCTT TGCTGGAAAC ATCAATAACT TTAACGTCAT CTACCTCTTT
ACCCAAGGGG GACCTGCCGA TGGCAAATAT ACTTATGCAG GTTCAACTGA TTTGTTAATA
TCTTGGATCT ATAAGCTGAC TTTGAACCAT AGCCAATTTT ATATGGCTTC CGTACTTTCC
ATTCTGATTT TTATTGTAGT AGCAGTATTT TCAATTTGGA ACTTCCGACA AACAAAAGCA
TTTAAAGAAG AGGAAATGAT GTAA
|
|---|
| Protein sequence | MSPTPNLVAE PERRQTKKAS TAAVLSFLFM GLGQIYNRQY IKGILYALVE IYVIVFLTNP
IVNGLWGLIT LGEQAQVRRR GRVVIEGDHS IFLMIEGLII VIVLVIFLLF YIYNIRDAYK
TGKLHETGEK VNSFIESLKK SWEYGYAYIL LTPAAIFTLF LSVLPLTFGI LIAFTNFSSP
NHLPPKNLVD WVGFQNFIDL FRLQAWSKTF YGIATWNIIW AILATFTTFF VGMFFALIIN
HNKVRLKRMW RTIFILPWAV PQFISILVFR NIFNGQFGPL NQYLSTLGID PIPWLSDPFW
AKVALVTINI WLGFPFWMAL IAGVLTNIDK ELYEAAEVDG ASTFQKFRSI TFPLLMYYTS
PLLIMSFAGN INNFNVIYLF TQGGPADGKY TYAGSTDLLI SWIYKLTLNH SQFYMASVLS
ILIFIVVAVF SIWNFRQTKA FKEEEMM
|
|---|
| |