| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0686 |
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| Symbol | rocD |
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| ID | 7978866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | - |
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| Start bp | 750429 |
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| End bp | 751625 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644797671 |
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| Product | ornithine--oxo-acid transaminase |
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| Protein accession | YP_002948845 |
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| Protein GI | 239826221 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000099191 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAAAA CCACTGAAAT TATCCGCTTA ACAGAGCAAT ACGGCGCGAA CAACTATCAT
CCGCTTCCGG TTGTTCTTAC TAAAGGAGAA GGGGTATGGG TAGAAGACCC GGAAGGCAAT
CGTTATATGG ATATGTTAAG CGCTTACTCA GCCGTCAACC AAGGGCATCG CCACCCGAAA
ATTATTCAAG CACTAAAAGA GCAAGCAGAT CGCATCACAT TAACTTCGCG AGCGTTCCAT
AATGATCAGC TAGGCCCTTG GTATGAAAAA GTCGCGAAAT TAACCGGTAA AGACATGGTT
TTACCGATGA ATACAGGTGC AGAAGCGGTA GAAACCGCTT TTAAAGCGGC GCGGCGCTGG
GCGTACGACG TTAAAGGCGT AGAAAAAGAT AAAGCGGAAA TTATCGTTTG TGAAAACAAT
TTCCATGGCC GAACGATGGC AGCGGTATCA ATGTCCTCTA GCGAAGAGTA TAAACGCGGT
TTCGGACCGA TGCTCCCAGG CATTAAAATC ATCCCATACG GCGATGTGGA AGCATTAAAG
AAAGCGATTA CACCAAATAC GGCAGCTTTT ATTTTTGAGC CGATTCAAGG CGAAGCAGGG
ATTAATATCC CGCCGGAAGG CTTTTTGAAA GAAGCGTACA ATGTATGTAA AGAAAACAAT
GTTCTTTATA TTGCGGATGA AATTCAATCT GGCCTCGGCC GTTCTGGAAA AATGTTTGCT
TGCGACTGGG AAAATGTCGT TCCAGATATG TACATCCTCG GTAAAGCATT AGGAGGCGGC
GTATTCCCTA TCTCTTGCGT AGCAGCAAAC CGCGACATTC TCGGCGTGTT TAATCCTGGC
TCCCACGGCT CCACATTTGG CGGAAACCCA CTTGCATGCG CGGTATCCAT CGCGGCGCTT
GATGTCATTA TCGAAGAAAA ATTGCCGGAA CGTTCGTTGG AATTAGGGAA CTATTTCATC
GAAAAACTGC GTGAAATTCA ACATCCAGAC ATTAAAGAAG TGCGCGGAAG AGGACTGTTT
ATTGGTGTGG AACTTCATAC TTCCGCCCGT CCATATTGTG AAAAATTAAA ACAAGAAGGG
CTGTTGTGCA AAGAAACGCA CGATACCGTC ATTCGTTTTG CTCCACCGCT CGTTATTACA
AAAGAAGAAT TGGATTGGGC AATAGAGCGG GTGAAAAAAG TGTTTGCTGG GGTATAA
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| Protein sequence | MSKTTEIIRL TEQYGANNYH PLPVVLTKGE GVWVEDPEGN RYMDMLSAYS AVNQGHRHPK
IIQALKEQAD RITLTSRAFH NDQLGPWYEK VAKLTGKDMV LPMNTGAEAV ETAFKAARRW
AYDVKGVEKD KAEIIVCENN FHGRTMAAVS MSSSEEYKRG FGPMLPGIKI IPYGDVEALK
KAITPNTAAF IFEPIQGEAG INIPPEGFLK EAYNVCKENN VLYIADEIQS GLGRSGKMFA
CDWENVVPDM YILGKALGGG VFPISCVAAN RDILGVFNPG SHGSTFGGNP LACAVSIAAL
DVIIEEKLPE RSLELGNYFI EKLREIQHPD IKEVRGRGLF IGVELHTSAR PYCEKLKQEG
LLCKETHDTV IRFAPPLVIT KEELDWAIER VKKVFAGV
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