Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0522 |
Symbol | |
ID | 7978237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 592660 |
End bp | 593574 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644797523 |
Product | pseudouridine synthase, RluA family |
Protein accession | YP_002948697 |
Protein GI | 239826073 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGGTCAA AAAAAGGAGA TTGGCTTGAA TGTATTATTC CTTCGTTTTG GAAAGGGCGC ACGATTGAAT CGCTGCTAAA AGAAGTGTGG TGCGCCTCGA AAAAATTAGC TCATCAGCTG CGCATGGAAA AAGGAGTAAA ATTAAACGGG AAAGAAGTAT CGTGGCAAAT CCCATTACAA GAAAATGACC GTTTGCAGTT GTATCTTTAT AAACCGGAGG CTTCCAGCCT TCTCCCAGAA TATCGCGAAC TTTCGGTTTT ATGGGAGGAT GAGCATCTTT TGATTATTAA TAAGGATGCC GGAATGGATA TACATCCTTC TGAGCCTTCT CAAACAGGAA CTTTAGCGAA CGCGGTCGCT TTTTATTTAC AATCGCAAGG CATTTTGACG AAAGTACGGC ATATTCATCG ACTTGATCGT GACACATCAG GAACGATTTT ATTTGCCAAA CATCCGCTTG CAGGAGCAAC GCTCGATCGG ATGTTGGCAA AACGGCAAAT CAAACGGACG TATGTAGCGC TCGTCCATGG GATCATGAAA AATAAATCAG GAACGATTTC CGCGCCGATT GGACGCGACC GCCATCATCC AACGAGACGA AGAGTTTCGC AAACGGGTGC AAAAGCGGTA ACACATTATC GCGTCTTACA TACGTTTCCG AATCAGCAAC TATCGCTTGT AGAACTTTCC CTTGACACCG GGCGCACGCA TCAAATCCGC GTCCATATGA GTTACATCGG CCATCCATTA GTCGGAGATG TTCTTTATGG CGGAGAAAAC ACGTTTCATC GACAAGCACT TCATGCCGCC AAACTATCGT TCTTGCATCC TTTTACAAAT GAAATGATTT CATGTATTGC ACCTGTTGAT GATTTTCCTG TTGATATCAC TCGGTTTTAC ATGGATCCAC CATAA
|
Protein sequence | MWSKKGDWLE CIIPSFWKGR TIESLLKEVW CASKKLAHQL RMEKGVKLNG KEVSWQIPLQ ENDRLQLYLY KPEASSLLPE YRELSVLWED EHLLIINKDA GMDIHPSEPS QTGTLANAVA FYLQSQGILT KVRHIHRLDR DTSGTILFAK HPLAGATLDR MLAKRQIKRT YVALVHGIMK NKSGTISAPI GRDRHHPTRR RVSQTGAKAV THYRVLHTFP NQQLSLVELS LDTGRTHQIR VHMSYIGHPL VGDVLYGGEN TFHRQALHAA KLSFLHPFTN EMISCIAPVD DFPVDITRFY MDPP
|
| |