Gene GWCH70_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_0478 
Symbol 
ID7978627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp530905 
End bp531870 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID644797455 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002948655 
Protein GI239826031 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000015743 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAAC CGCTGTTGCA AGTGAAAGGT CTTAAAAAAT ATTTTCCGAT TACAGGAGGA 
GTATTTGGAA AAAAAATCGG TGAAGTGAAA GCGGTCGATG ATGTCACATT TACCGTTTAT
AAAGGAGAAA CGCTCGGCAT CGTCGGGGAA AGCGGCTGCG GCAAATCAAC GACCGGCCGG
ATGCTTCTTC GCTTAATTGA GCCGACAGAA GGTTCGATTG TATTCGAAGG AAAAGAAGTG
ACAAAGCTAT CTAAATCGGA ATTACGGAAA ATGCGGCGCG ATATGCAAAT GATTTTCCAA
GATCCTTTTG CATCGTTGAA TCCGCGCCAT ACGGTTGAAA AAATATTGGA AGAGCCGCTC
GTGGTCCATG GAATAGGATC GAAAGAGGAA AGAAAAAAGC GCGTGCAAGA GATGCTCGAA
GTCGTTGGGC TTGGGCGTTA TCACGCGAAG CGGTATCCTC ATCAATTTAG CGGCGGACAG
CGGCAGCGTA TCGGTATTGC AAGGGCGTTA ATGACCAACC CGAAGCTCAT TATCGCCGAT
GAGCCAGTAT CGGCGCTTGA CGTGTCGATT CAAGCGCAAG TGTTGAATTT GCTAGAAGAC
TTACAAAAAG AATTTGGACT TACCTATATT TTTATTGCCC ATGATTTAGG GGTTGTCCGT
CATATTAGCG ACCGCGTTGG CGTAATGTAT TTAGGTCGTC TAGTCGAATT GGCTGATAGC
GATCAGTTAT ATGAATCGCC AAAACATCCG TATACGAAAG CGCTGCTTTC CGCTGTTCCG
ATTCCAGATC CCGAATATAA AAAGGAAAGC CAGCTGTTAT CAGGCGATTT GCCAAATCCC
GCAAATCCGC CGCAAGGGTG TGCATTTCAT ACGCGCTGCA GCGCTTGCAT GGACATTTGC
AAGCAAAAGC GGCCGGAGAT GAAAGAAGTA GAAAAAGGCC ATTACGTTGC TTGCCATCTT
TATTAG
 
Protein sequence
MSEPLLQVKG LKKYFPITGG VFGKKIGEVK AVDDVTFTVY KGETLGIVGE SGCGKSTTGR 
MLLRLIEPTE GSIVFEGKEV TKLSKSELRK MRRDMQMIFQ DPFASLNPRH TVEKILEEPL
VVHGIGSKEE RKKRVQEMLE VVGLGRYHAK RYPHQFSGGQ RQRIGIARAL MTNPKLIIAD
EPVSALDVSI QAQVLNLLED LQKEFGLTYI FIAHDLGVVR HISDRVGVMY LGRLVELADS
DQLYESPKHP YTKALLSAVP IPDPEYKKES QLLSGDLPNP ANPPQGCAFH TRCSACMDIC
KQKRPEMKEV EKGHYVACHL Y