| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0475 |
|---|
| Symbol | |
|---|
| ID | 7979443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 526158 |
|---|
| End bp | 527912 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644797452 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002948652 |
|---|
| Protein GI | 239826028 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR01192] glucan exporter ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00181463 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAATTA TTCGCCGCTA TATGCAATTT GTGCGTCCAT ATAAATGGTA TATTATTGCA
ACGATGATCA TCGGAATTAT TAAGTTTGCG ATTCCGCTTC TCATTCCGTT GTTATTAAAA
TATGTCGTTG ATGAAATTAT CGCAAATACG AAGTTGCCGA TGTCCGTCAA GACAGAGCGT
CTTTGGTGGG CTCTCGCTGT GATGTTAGTG ATTTTTGTCC TCATTCGCCC GATTGTCGAA
TATTATCGGC AATATTTTGC GCAGTGGACG GCAAGCAAAG TGCTCTATGA CATTCGCAAT
CGATTATTTA CACATATGCA AAAATTAAGC TTTACGTATT ACTCTAACCA TCGCACAGGG
GAAATTATTT CGCGTGTGAT TAACGATGTC GAGCAAACGA AAGATTTTAT TATTACAGGA
CTGATGAATC TTTGGCTAGA TATGACCACG ATTATTATTG CACTTATTAT TATGATGAAG
ATGGATATTA AATTAACGCT TGTTTCCATT AGTACGCTGC CGCTTTATGC ATTTTCCGTA
AAATACTTTT TCGGGCGTTT GCGGCAACGG ACGAGAATGC GTTCCCAAGC GCTGGCGGAA
CTGCAAGCAT ACTTGCACGA ACGAGTACAA GGAATGCCGG TGATTAAAAG TCTTGCGATC
GAAGAAGAGG AACAGAAACG TTTTTCCGAA CAAAACAACA ATTTTTTAAC AAAGGCGCTT
ATGCATACGA GCTGGAATGC AAAATCGTTC TCTGTTGTGA ATACAGTGAC AGATATTGCC
CCCATCATTG TGATTGGCTA TGCCGGCTAT CAAGTATTGC TTGGTCATAT TACCGTCGGA
ACATTGGTTG CTTTCGTCGG TTATATTGAT CGGCTTTATA GCCCGTTGCG CCGCCTTGTG
AACTCGTCAA CGACATTAAC GCAGTCGTTC GCCTCGATGG ATCGAATGTT TGAGTTTTTG
GATGAGACAT ATGATATTGT GGATGCGCCA AATGCGATGG ACTGCAAGGA AGTAAAAGGG
GACATCGTAT TTGAAAACGT AACTTTTGCT TATAGTAAAA ACGAACCGCC TGTACTTCGC
GATATTTCAT TTTCTGTAAA AGCCGGGGAA ACGATCGCTC TTGTCGGCAT GAGCGGGGGA
GGAAAATCTA CATTAGTAAG CCTTATTCCA CGGTTTTATG ACGTCACAAA AGGACGCATC
TTATTAGACG GCATAGATAT TCGCGACATA CGCGTCCGCA GTCTGCGCGA TCAAATCGGG
ATGGTGTTCC AGGATAGTTT TTTATTTAGC GATTCGGTGA AAGAAAATAT TTTGCTCGGA
AAACCAAGTG CGACAGACGA AGAAGTGATT GCCGCCGCAA AAGCGGCCAA CGCTCACGAT
TTTATTATGA ATTTGCCGGA CGGTTATGAT ACGAAGGTCG GAGAACGCGG CATTAAATTA
TCCGGCGGGC AAAAACAGCG AATCGCCATC GCCCGTGTCT TTTTGAAAAA TCCTCCGCTT
CTTATTTTTG ACGAAGCAAC ATCAGCGCTT GATCTAGAAA GCGAGCATTA CATTCAAGAG
GCAATGGAAC GGCTCGCGAA AAATCGGACT ACGTTTATCG TTGCCCATCG CCTGTCAACG
ATTACTCATG CGGACCGGAT TTTTCTTATC GAAGATGGAA AGATTGTTGA AAGCGGCACG
CATGATGAAT TAATGGCCAG AAAAGGACAA TATTATCACT TATTTACGAT TCAACAATTG
AATTACACGG AGTGA
|
|---|
| Protein sequence | MAIIRRYMQF VRPYKWYIIA TMIIGIIKFA IPLLIPLLLK YVVDEIIANT KLPMSVKTER
LWWALAVMLV IFVLIRPIVE YYRQYFAQWT ASKVLYDIRN RLFTHMQKLS FTYYSNHRTG
EIISRVINDV EQTKDFIITG LMNLWLDMTT IIIALIIMMK MDIKLTLVSI STLPLYAFSV
KYFFGRLRQR TRMRSQALAE LQAYLHERVQ GMPVIKSLAI EEEEQKRFSE QNNNFLTKAL
MHTSWNAKSF SVVNTVTDIA PIIVIGYAGY QVLLGHITVG TLVAFVGYID RLYSPLRRLV
NSSTTLTQSF ASMDRMFEFL DETYDIVDAP NAMDCKEVKG DIVFENVTFA YSKNEPPVLR
DISFSVKAGE TIALVGMSGG GKSTLVSLIP RFYDVTKGRI LLDGIDIRDI RVRSLRDQIG
MVFQDSFLFS DSVKENILLG KPSATDEEVI AAAKAANAHD FIMNLPDGYD TKVGERGIKL
SGGQKQRIAI ARVFLKNPPL LIFDEATSAL DLESEHYIQE AMERLAKNRT TFIVAHRLST
ITHADRIFLI EDGKIVESGT HDELMARKGQ YYHLFTIQQL NYTE
|
|---|
| |