| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0448 |
|---|
| Symbol | |
|---|
| ID | 7978602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 503628 |
|---|
| End bp | 505157 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644797428 |
|---|
| Product | alkyl hydroperoxide reductase, F subunit |
|---|
| Protein accession | YP_002948628 |
|---|
| Protein GI | 239826004 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
|---|
| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATATTGG ATGCCGAGAT AAAAGCGCAA TTAGCCCAAT ATCTACAATT GATGGAAAAT
GACATTGTTC TAAAAGTGAG CGCGGGAGAC GATCAAGTTT CCCGCGATAT GCTTGCTTTA
GTCGATGAAT TGGCCGCAAT GTCACCAAAA ATTAAAGTAG AGAAAACGCA GTTGCAAAGA
ACGCCAAGCT TTAGTGTTAA TCGTATCGGC GAAGATACTG GTATAACATT CGCTGGTGTT
CCTTTAGGGC ATGAGTTTAC CTCCTTAGTG CTTGCTCTGC TTCAAGTAAG CGGAAGACCG
CCAAAGGTTG ATCAGAACGT GATTGACCAA ATTAAAAGCA TAAAAGGCAC CTATCACTTC
GAAACTTACG TGAGTTTGAC ATGCCATAAT TGTCCTGAGG TGGTTCAAGC GTTGAACTTG
ATGAGCGTCC TGAACACGGG CATTTCGCAT ACGATGATCG ATGGCGCAGC CTTTAAGGAC
GAAGCGGAAA GAAAAGGAAT TATGGCAGTT CCAACAGTAT TCCTAAATGG AGAGCTCTTT
GGTAGCGGTC GGATGTCGTT GGAGGAAATT TTGGCGAAGA TGGGGAATAC TTTGGACGCA
TCACATTTCG CTGAAAAAGA ACCATTTGAT GTACTGGTTG TCGGTGGCGG ACCAGCCGGA
GCAGCTGCAG CGATTTATGC GGCGCGTAAA GGTGTTCGTA CAGGCATTGT TGCGGAACGT
TTTGGCGGTC AAATATTGGA TACATTAGGC ATTGAAAACT TTATCAGTGT GAAATATACG
GAAGGCCCTA AGCTTGCAGC AAGCCTTGAA GAGCATGTCA AACAGTACGA TATTGATATT
ATGAATTTAC AGCGTGCCAA ACGCTTGGAA AAGAAAGATC TTATTGAAAT CGAACTTGAA
AATGGCGCCG TGTTAAAAAG CAAGACGGTT ATTATCGCAA CGGGGGCTCG CTGGCGCAAC
CTTGGCGTAC CAGGCGAGGC GGAGTTTAAG AACAAAGGGG TCGCATACTG CCCACATTGC
GATGGTCCGT TGTTTGAAGG AAAACATGTT GCGGTCATTG GTGGCGGCAA TTCCGGTATT
GAGGCAGCCA TTGATCTTGC AGGCATTGCA AAGCATGTCA CCGTTCTTGA GTTTATGCCG
GAGCTGAAAG CCGATGCTGT TTTACAAGAG CGCCTTTATA GCCTGCCTAA CGTAACGGTT
TTAAAGAACG TGCAAACAAA AGAAATTACC GGTACGGACA AAGTAAATGG CATCACTTAT
ATCGACCGGG CGACCGGAGA GGAACATCAT ATTGAATTGC AAGGGGTATT TGTTCAGATC
GGCTTAGTGC CAAATACGGA CTGGTTAGAT GGAACGATTG AACGCAATCG CTTCGGCGAA
ATTATCGTCG ATAAGCATGG CGCTACGAAC ATCCCTGGAG TGTTTGCTGC AGGTGACTGC
ACGGATAGCG CGTATAAGCA GATCATTATT TCAATGGGGT CAGGCGCTAC CGCAGCCTTA
AGTGCATTTG ATTACCTTAT TCGAAATTAA
|
|---|
| Protein sequence | MILDAEIKAQ LAQYLQLMEN DIVLKVSAGD DQVSRDMLAL VDELAAMSPK IKVEKTQLQR
TPSFSVNRIG EDTGITFAGV PLGHEFTSLV LALLQVSGRP PKVDQNVIDQ IKSIKGTYHF
ETYVSLTCHN CPEVVQALNL MSVLNTGISH TMIDGAAFKD EAERKGIMAV PTVFLNGELF
GSGRMSLEEI LAKMGNTLDA SHFAEKEPFD VLVVGGGPAG AAAAIYAARK GVRTGIVAER
FGGQILDTLG IENFISVKYT EGPKLAASLE EHVKQYDIDI MNLQRAKRLE KKDLIEIELE
NGAVLKSKTV IIATGARWRN LGVPGEAEFK NKGVAYCPHC DGPLFEGKHV AVIGGGNSGI
EAAIDLAGIA KHVTVLEFMP ELKADAVLQE RLYSLPNVTV LKNVQTKEIT GTDKVNGITY
IDRATGEEHH IELQGVFVQI GLVPNTDWLD GTIERNRFGE IIVDKHGATN IPGVFAAGDC
TDSAYKQIII SMGSGATAAL SAFDYLIRN
|
|---|
| |