Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0430 |
Symbol | |
ID | 7978586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 485977 |
End bp | 486630 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644797415 |
Product | TrkA-N domain protein |
Protein accession | YP_002948615 |
Protein GI | 239825991 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00150602 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGAC AATATGCTGT GATCGGATTA GGAAGATTCG GTTCTAGTCT GGCTACGACC TTGCACCAGG CTGGAAATGA AGTTTTGGCC ATTGATCGAA ATGAAGAACG AATTGAAGAA TATAAAGATC ATGTTACATA TGCGGTTGTC GCTGACTCAA CAGATGAAGA AGCATTAAAG AGTGTCGGCA TTCGAAATTT TGACGCTGTC ATCGTAGCGA TTGGTGATGA TATTCAAGCA AGTATTTTAA CGGTGTTAAT CCTTAAAGAA TTAGAGGTCA AGAAAGTTGT GGCAAAAGCC ATTAATAAAC GGCACGGTCA AGTCTTATAT AAAGTGGGGG CTGATTGGGT TGTATTTCCG GAACGGGATA TGGGAGAGCG GGTTGCAACC CAGCTCATGT CACCGAACGT GCTTGACTAT ATTGAACTCG CGAAAGATTA TAGTATAAAA GAAGTAAAAG TCCCCCCGTC AATGATCGAA AAAAATTTAA GAGAATTAAA TCTCAGGGCA AGGTTTAATA TAACGGTCAT CGCTATTATC AGCGATGGAA AAGTAAGCAT TTCCCCTTCG CCTGATCGAA TCATTAAAGA AGGAGATATA TTAGTCGTGA TCGGGGAAAA TAAAGATTTG GACCAGTTTG AAAAGTTTAA CTAA
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Protein sequence | MKGQYAVIGL GRFGSSLATT LHQAGNEVLA IDRNEERIEE YKDHVTYAVV ADSTDEEALK SVGIRNFDAV IVAIGDDIQA SILTVLILKE LEVKKVVAKA INKRHGQVLY KVGADWVVFP ERDMGERVAT QLMSPNVLDY IELAKDYSIK EVKVPPSMIE KNLRELNLRA RFNITVIAII SDGKVSISPS PDRIIKEGDI LVVIGENKDL DQFEKFN
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