Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0387 |
Symbol | |
ID | 7978547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | - |
Start bp | 445134 |
End bp | 445979 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644797374 |
Product | band 7 protein |
Protein accession | YP_002948574 |
Protein GI | 239825950 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.003023 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAA CAAAGGCATG GTATATGAAC GGGTTTGCTG GGATTATTGG TATTGCTGTA TTAGTGGCAG TGGCGATTAT TAGTTTGCTT CAGCAGCTAG TCATTATTGC CGCTCTATTC GTTGTTGCCG CCATCGTGTT GGCCAGCGGC ATCACCATTG TTCAGCCGAA CCAAGCAAAA GTGTTGATTT TCTTTGGCCG CTATTTAGGT ACGATTCGCG ACAGCGGACT ATTTCTTACT GTTCCGCTTA CGATTAGGCA AAACGTTTCT TTGCGCGTCC GTAATTTTAC CAGCAAAAAA TTAAAAGTAA ACGATGTTCA AGGCAACCCT ATCGAAATTG CCGCTGTTAT TGTATTTCGG GTCATCGATT CCGCAAAAGC GATTTTTGAT GTGGATGACT ATGAAGAGTT TGTAGAGATT CAAAGTGAGG CAGCCATTCG CCATGTTGCG ACGAAATATC CTTATGATAC CTTTACCGCT GATGATGAAA TCACATTACG AGGCAATGCA GATATTATTT CCGATGTCCT TGCCAACGAG TTGCAAGAGC GCCTAAAAGT AGCTGGAGTG GAAGTAATCG AAGCTCGCCT TACTCATCTC GCCTACTCTC CAGAAATTGC AAGCGCGATG TTGCAACGCC AGCAAGCAGC CGCGATTTTA GCGGCAAGAA AGAAAATTGT CGAAGGTGCT GTCTCCATGG CGCAAATGGC GATCGAGCAA CTTGACAAAG AAGGAATTTT AGAGTTAGAT GATGAACGAA AAGCAAACAT GGTTAACAAT TTAATGGTCG CCATCGTATC CGAACGCGCG ACCCAGCCGG TGATCAATAC CGGAAGTCTA TACTAA
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Protein sequence | MKETKAWYMN GFAGIIGIAV LVAVAIISLL QQLVIIAALF VVAAIVLASG ITIVQPNQAK VLIFFGRYLG TIRDSGLFLT VPLTIRQNVS LRVRNFTSKK LKVNDVQGNP IEIAAVIVFR VIDSAKAIFD VDDYEEFVEI QSEAAIRHVA TKYPYDTFTA DDEITLRGNA DIISDVLANE LQERLKVAGV EVIEARLTHL AYSPEIASAM LQRQQAAAIL AARKKIVEGA VSMAQMAIEQ LDKEGILELD DERKANMVNN LMVAIVSERA TQPVINTGSL Y
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