| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0382 |
|---|
| Symbol | |
|---|
| ID | 7977491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 439708 |
|---|
| End bp | 441366 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644797370 |
|---|
| Product | thiamine pyrophosphate protein |
|---|
| Protein accession | YP_002948570 |
|---|
| Protein GI | 239825946 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACAGA CGATCCGAAA CACCACCGCG GCGAAAGCAA TCGTTCATTG CTTAAAACGA
GAGGGTATTT CCCATTTGTT TTGCGTGCCG GGAGAAAGCT ATTTGCCGCT GATGGATGCC
ATTTTCGATG AACCTTCGCT TCAACTGATT TCGGCCCGCC ATGAAGGAGG CGCTTCGTTT
ATGGCGGAAG GTTATGCAAA AGCGTCAGGG AAACCCGGAG TCGTGCTGGC GACGCGGGGA
GTCGGCGGCG CTAACTTAGC GATTGGTGTC CATACGGCGA GGCAAGATTC CACGCCGATG
GTCGTATTTT TAGGGCAAGT ACACAGCCAT TTTCGCGGCA GGGAAGGATT TCAGGAAGTC
GATTTAGACC GGTTTTTCCA GCCGATTGCA AAATGGACGG TGGAAATTCG CGAGGCGGAG
CGAATACCCG AGCTGGTGCA GCGGGCGTTT CGCATCGCCA AAACGGGCAG GCCAGGTCCT
GTTGTCATTT CGCTTCCGGA AGATATATTT CTTCAAGATA TTGCCGAAGC GGTCATTTCG
AATGTAGATA TACCGAGACC TGCTCCAAGC ACAGAGGATG TGCGGAGCGT GCAGGAAATA
TTGCAAAGGG CGAAACGGCC GGTTGTCATC GCCGGCGGAG GAGTAAAGCT GGCTAAAGCG
GAACAGCTGT TGCGGTTATT TGCTGAAAAA TATTCCATTC CTGTGGCGGC TGCTTTCCGC
CGCCATGATG TGTTCCCCAA TGATCATCCG CTTTATGTCG GCCATCTTGG ATTAGGAACG
CCGAAATCCA TTATCGAGAC AGTGAAGCAG GCCGATGTCG TGATCGCGAT CGGGACGAGA
TTATCGGAAG TGACGACGCA AGATTATCGC TTGCTGTCAT CGGATCAGAC GCTCATTCAT
ATCGATATCG ACAGCGATGT ATTAGGAAAA GTATATCCAC CGGACATTTC CATCCTAGCA
GATTGCAAAG AAACGCTCTT AAAATTGCTA AAAATCGTTG TGCAGCCGTC TTGGCGCGAT
TGGGTAGCAG CAAGGAGGAA ACAATATGAA CAAGTATCGA TACTTCCGGT GGAAAAACGG
AATTTAAATG AAGCGATTAT CGCCAGCCTG CAAGAACATT TGCCAAACAA TTCGATCATT
ACGAATGATG CTGGCAATTT CGCCGGCTGG CTCCATGCCT TTTTCCAGTT TACCGAAGAG
CATACGTATA TCGGCCCTAC TTCCGGGGCG ATGGGATATG GCATGCCTGC AGCGATTGGC
GCCAAGCTTG CTTTCCCGGA GCGCGTTGTC GTTTCTCTAT CAGGAGACGG CGGTTTTATG
ATGACAGTGC AGGAGTTAGA AACAGCTGCT AGATATGAAA TTCCTATTAT TAGTGTTGTT
TTTAATAACC GCATGTATGG AACGATCCGG ATGCATCAAG AACTGCATTT TCCAAAGCGA
GTCATCGGAA CAGATTTAGG GAATGTATCA TTTGCGGAAT TGGCTAAATG CTTAAATGGC
AACGGCATTC AAGTAGAAAC GGAACAGCAA TTTACCGAAA CGCTCCTTCA ATCTCTCCAT
GCAAAGAAAC CTACGGTCAT AGAAGTACTG ACGGATCCAA ATCAAATTTC CGTGACGGCA
ACGATCGCTG AGTTGCGAAA ACGATCGAAT TCTGTATAA
|
|---|
| Protein sequence | MKQTIRNTTA AKAIVHCLKR EGISHLFCVP GESYLPLMDA IFDEPSLQLI SARHEGGASF
MAEGYAKASG KPGVVLATRG VGGANLAIGV HTARQDSTPM VVFLGQVHSH FRGREGFQEV
DLDRFFQPIA KWTVEIREAE RIPELVQRAF RIAKTGRPGP VVISLPEDIF LQDIAEAVIS
NVDIPRPAPS TEDVRSVQEI LQRAKRPVVI AGGGVKLAKA EQLLRLFAEK YSIPVAAAFR
RHDVFPNDHP LYVGHLGLGT PKSIIETVKQ ADVVIAIGTR LSEVTTQDYR LLSSDQTLIH
IDIDSDVLGK VYPPDISILA DCKETLLKLL KIVVQPSWRD WVAARRKQYE QVSILPVEKR
NLNEAIIASL QEHLPNNSII TNDAGNFAGW LHAFFQFTEE HTYIGPTSGA MGYGMPAAIG
AKLAFPERVV VSLSGDGGFM MTVQELETAA RYEIPIISVV FNNRMYGTIR MHQELHFPKR
VIGTDLGNVS FAELAKCLNG NGIQVETEQQ FTETLLQSLH AKKPTVIEVL TDPNQISVTA
TIAELRKRSN SV
|
|---|
| |