Gene GWCH70_0353 details

Gene Information

• Locus tag: GWCH70_0353
• ID: 7977466
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: +
• Start bp: 402320
• End bp: 404263
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 644797344
• Product: protein of unknown function DUF181
• Protein accession: YP_002948544
• Protein GI: 239825920
• COG category: [S] Function unknown
• COG ID: [COG1944] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00702] uncharacterized domain; [TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.742024
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGCTC GCGTATTGAT GGTTGGAGAA GGAGTGTTGG CGGATTTTGT GTATGAAAAA 
TTGTCCGTCC AATATCAGGT AGTTCGGCAA ATCGATTTCG AGGAAGGAAT TCCGGAAGAA 
ACAGGTTTGG CTCTGGTGTT GCATGATGCT TGGCATCCCT CCGTTCACCA CAAGGCGGAA 
GAGGCATTAC GATCGTCAGG CATTCCATGG CTCCGGGGCT TTGTTTCATT TGGGGAGGGC 
GTGATCGGTC CGCTAGTTCG CCCTAATACC CCGGGATGTT CTCAGTGTGC TGACATGCGG 
CGCCTTATAG CGGGATACGA CCGCAAGGAA ATGTGGGAGC TGCAACAGGT GATGGCGGTG 
CAAGGGGGAA TACAGCATGA TGCATGGGCA TCACGAATAG GACTTTTGCA GATGGCTCAC 
CTGATTGTCG CGGAGACGCA GAGGGTGTTG GAAGGCAGTC ATACCCGTTT AGAAGAAAGG 
TTGTTCCTAA TCAACCTGAA AACATTAAAG AACTCATGTC ACTTCTTTCT GCCCGACCCG 
TTATGTACGG TATGCAGCCA ATTACCTGAC GATTCGCCGG CAGCAGCCCG CATATCGCTG 
CAACCAAGTC CGAAGATCAG CGCTGACAGT TACCGCTGCC GTCCGATCGA GGAGCTGAAA 
GAAGTTCTGA TCAAAGACTA TCTAGATTAT CGAACTGGAT TATTGAATGG TAAAATGCAT 
AATTTCGCGT TGCCGTTTGC GGATGTTGTT GTAAATATGC CGATGTTTAT AGGGGACGAG 
GGAGTAGCAG GCCGGACTCA TTCCTATGAG GTTAGCGAGT TAACCGCCAT TTTGGAGGGG 
TTAGAGAGAT ATTGTGGCAT CGAAGCTCGT GGCAAACGGA CAGTGATTCA TGACAGCTAC 
CGAAATTTGA AAGATCAAGC ACTCAACCCA GTAAAGGTAG GAGTGCATGC GAAGGAACAG 
TATGCGCGAC CTGATTTTCC GTTCAAACCG TTTCATCCGG ATCGTCCAAT GAATTGGGTA 
TGGGGCTATT CGCTTTTACA AGAGCGTCCG ATTTTGGTTC CAGAGTTGCT CGCATATTAC 
AGTTTGGGAG GTGGGGATGG CTTTGTCTAT GAAACTTCCA ACGGATGTGC ATTAGGCGGG 
AGTTTAGAAG AAGCGATTTT CCATGCCATT TTGGAGGTGG TGGAGCGCGA TTCATTCTTG 
ATGGCTTGGT ATGCGCAGCT GCCTCTTCCG CGTCTTGACC TTCGTTCGGC TAACGATAAA 
GAATTACAGT TGATGGTCGA TCGTGTACGT GCGGTGGCGG GATATGATCT GTATTTTTTC 
AACTCGACGA TGGAGCACGG AATTCCAAGC GTCTGGGCAG TGGCGAAAAA CAGAAAACAA 
AAGGGATTGA ATCTCATCTG TGCCGCTGGA TCTCATCCGG ACCCTATACG GGCGGTGAAA 
AGCTCGATTC ACGAGTTAGC AGGCATGATG CTTGTGCTTG ACGAGAAATT TGAGGCAAAC 
CGAAAGAAAT ATGAAAAAAT GTTGCATGAT CCGCTATTAG TGCGGCAGAT GGAAGACCAT 
GGCATGCTGT ACGGTTTGCC GGAAGCAGAG GAGCGCCTGC AATTTTTGTT GGATGATCAT 
CGTCCGTTGC GAACGTTTGA AGAGGAATTC AAGCAGCAAA CGAAGAATGC AGACTTGACG 
GATGACCTGC GGGTTATTCT TCAGAAGTTC CGACGATTGA ATCTTGAGGT AATTGTCGTG 
GACCAGACAA CACCTGTCAT CAAACGGAAT GGATTATATT GTGTGAAAGT ACTGATTCCG 
GGAATGTTAC CGATGACATT TGGGCATCAT CTTACCCGCG TGACAGGCCT GGAGAGGGTG 
CTCCGGGTAC CAATGGAACT CGGGTATACG ACAAAACCGC TCACGCTTGA ACAGCTTAAT 
CCACATCCCC ATCCGTTCCC ATAG 

 

Protein sequence

MGARVLMVGE GVLADFVYEK LSVQYQVVRQ IDFEEGIPEE TGLALVLHDA WHPSVHHKAE 
EALRSSGIPW LRGFVSFGEG VIGPLVRPNT PGCSQCADMR RLIAGYDRKE MWELQQVMAV 
QGGIQHDAWA SRIGLLQMAH LIVAETQRVL EGSHTRLEER LFLINLKTLK NSCHFFLPDP 
LCTVCSQLPD DSPAAARISL QPSPKISADS YRCRPIEELK EVLIKDYLDY RTGLLNGKMH 
NFALPFADVV VNMPMFIGDE GVAGRTHSYE VSELTAILEG LERYCGIEAR GKRTVIHDSY 
RNLKDQALNP VKVGVHAKEQ YARPDFPFKP FHPDRPMNWV WGYSLLQERP ILVPELLAYY 
SLGGGDGFVY ETSNGCALGG SLEEAIFHAI LEVVERDSFL MAWYAQLPLP RLDLRSANDK 
ELQLMVDRVR AVAGYDLYFF NSTMEHGIPS VWAVAKNRKQ KGLNLICAAG SHPDPIRAVK 
SSIHELAGMM LVLDEKFEAN RKKYEKMLHD PLLVRQMEDH GMLYGLPEAE ERLQFLLDDH 
RPLRTFEEEF KQQTKNADLT DDLRVILQKF RRLNLEVIVV DQTTPVIKRN GLYCVKVLIP 
GMLPMTFGHH LTRVTGLERV LRVPMELGYT TKPLTLEQLN PHPHPFP