| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0312 |
|---|
| Symbol | |
|---|
| ID | 7977430 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 358005 |
|---|
| End bp | 358754 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644797305 |
|---|
| Product | CRISPR-associated protein Cas6 |
|---|
| Protein accession | YP_002948505 |
|---|
| Protein GI | 239825881 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1583] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
|---|
| TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.196521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTGA CGATTGTGAT GAGTGGACGA GACAATCCTG TAACCCTTCC GCTACATTAT
CAACAACAAC TGCAGGGATT GCTATATCAT TCTTTGCGAA ATCCGAAGTT TTCTCAGTTT
TTGCATGAGG TAGGTTTTCG CAAAGAAAAA CGATCGTTTA AGTTATTTAC GTTTAGCCGT
CTATACGGCC CGCATCAATT AAATTTTGAG CGAAAAACAA TTACTTTTTA TGAGGAATTT
TACTGGCATG TCGGCACCGT ATTGCCTGAG CTGACGCAAG AACTCGGGGA GTATTTGTTA
TTGCATCCAG ATGTGCAAAT AGGTGGACAG CCAGTGGAAG TACAGCGGAT CGATGTGGAA
AAACGTGACA TTGAAGGAGA AGAAATCGAA ATAGAAATGC TTTCGCCTCT AACGGTTTAC
AGCACGTACG AAACCGTTGA CGGAAGCAAA AAAACACAAT TTTTTAGTCC ATACGATGAA
GTATTTTCCC ATTTAGTCGA ATTAAATTTC CGCAATAAAT ATGAAGCATA TTACGGCGTT
CCGCCGAAAG AACGATTGTT TATCGAGCCG ATTCGCGTGA CAGAAAAGCA TAAAGTCGTG
ACGATCTTTA AGGGATTTTA TATTACCGCT TGGCTCGGAC ATTATCGCCT TCGTTCGTCT
CCAGGCAACT TAACATTTTT GTATCGCGTC GGTATTGGTG GGCGAAACTC TCAAGGTTTC
GGCATGTTTC GCCTTCTTTC CGAACGCTGA
|
|---|
| Protein sequence | MRLTIVMSGR DNPVTLPLHY QQQLQGLLYH SLRNPKFSQF LHEVGFRKEK RSFKLFTFSR
LYGPHQLNFE RKTITFYEEF YWHVGTVLPE LTQELGEYLL LHPDVQIGGQ PVEVQRIDVE
KRDIEGEEIE IEMLSPLTVY STYETVDGSK KTQFFSPYDE VFSHLVELNF RNKYEAYYGV
PPKERLFIEP IRVTEKHKVV TIFKGFYITA WLGHYRLRSS PGNLTFLYRV GIGGRNSQGF
GMFRLLSER
|
|---|
| |