Gene GWCH70_0306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_0306 
Symbol 
ID7977425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp352147 
End bp353103 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content40% 
IMG OID644797299 
ProductCRISPR-associated protein, Csh2 family 
Protein accessionYP_002948499 
Protein GI239825875 
COG category[L] Replication, recombination and repair 
COG ID[COG3649] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02590] CRISPR-associated protein, Csh2 family 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAAA ATCGTTCTGA ATTATTATTT TTATACGATG TGCAATGGGC CAATCCAAAC 
GGGGATCCAG TCGATGAGAA TAAACCGCGG ATTGATGAAG AAACAGGTAG AAACATTGTA
ACGGATGTCC GATTAAAACG GACGATAAGA GATTATTTGC ATGATTTTTG CCATCAAGAA
ATTTTCGTGC GCGAAATTGC GGGAGACAAT GAGTACATCC AGGATGCGAA AATGCGGGCG
GAAGATTTTT TAGTCAAAGA CGGCGAAAAA TTGGATAAAT CCAAACTGTC GCTTGCCGAT
ATGAAACGGA TTATTAATGA AGAGATATTG CGTCAGTGCA TTGATGTCCG TCTGTTTGGA
GTGACGCTTC CTATCGAAAA AAACGCAAAA GAAAAAAGCT CTATTACCCA TACAGGACCG
GTTCAATTCA AAATGGGACA GTCGCTTCAC GCAGTCAAGC TGGAATATAT TAAAGGAACA
GGTGCTTTTG CATCGGGAAG CGGGATGATG CAAAAAACAT TTCGGGAAGA ATATGTTCTT
CCTTATTCCC TTATTGCTTT TTACGGTGTT ATCAATGAAG CAGCTGCCGC GTATACGAAA
CTCACGGAAG AAGATGTGCA ATTGTTACTC GATGCGATGT GGAATGGCAC GAAAAATTTA
ATTTCGCGCT CTAAAGTAGG GCAAATTCCT CGCTTATTGC TTCGTGTAGT CTATAAGGAA
AAACATTTTC ATATCGGCGA GCTAGATAAA TATATTTCTT TACATTCAGA AAAAGTCGAT
GAGGAAATCC GTGATGTTTC CGATTATGTG CTTGATACTG CTCCATTGAT CCGTGCAATG
GAAAAACAAA AAGAGAAAAT TGAAAGAGTA GAGATCAAAA AAGATGATCG TCTTGTGTGC
AGCGAAGATA TTATCGAAAG TTTGAAAGCT GCGGGAATTC CAGTAGAGAT CAAATAG
 
Protein sequence
MLQNRSELLF LYDVQWANPN GDPVDENKPR IDEETGRNIV TDVRLKRTIR DYLHDFCHQE 
IFVREIAGDN EYIQDAKMRA EDFLVKDGEK LDKSKLSLAD MKRIINEEIL RQCIDVRLFG
VTLPIEKNAK EKSSITHTGP VQFKMGQSLH AVKLEYIKGT GAFASGSGMM QKTFREEYVL
PYSLIAFYGV INEAAAAYTK LTEEDVQLLL DAMWNGTKNL ISRSKVGQIP RLLLRVVYKE
KHFHIGELDK YISLHSEKVD EEIRDVSDYV LDTAPLIRAM EKQKEKIERV EIKKDDRLVC
SEDIIESLKA AGIPVEIK