Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0292 |
Symbol | |
ID | 7979093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 332590 |
End bp | 333438 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644797285 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_002948485 |
Protein GI | 239825861 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000128623 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAG TGTATCGATT AATCGCCGAA AAACTGCCAG AAATGAGTCG AGCACAGCGG AAAATCGCGA AATACGTATT AAACAATCCT GAAGCGGTTC CGTTTTTCAC GGTCGGAAAG CTTGCGAAAA TGGCAGGAGT GAGCGAAGCG ACTGTTGTCC GCTTCGCAAC GTTTTTAGGA TTTTCGGGAT ATCCAGAGTG GCAACAGGCG ATGCAAGAAT CGATGAAGCG GCAATTGACA ACGGTGGAGA GACTGAAAAT TTCCGAAGAA GTGTACGATT CGGAAGACAA ATCGATTTTC GAAATGTTTC AAGAAGACAT CGAAAGAATT AAAGCAATGT CGGTGCAAAT CGACATGGAT TTGTTCTATC AAGCGGTGCA ATACATTACC GACGCGAAAC GAATATTTAT TATCGCAAAC CGAAGCGCGG TTTCATTAGG ACTGTTTTTA GAATTTTATT TCGACATATT GTTTGAGAAT GCGGAGCTCA TTCGTAATCC GCACGGCATA TCGGAAAAAC TGTTTCGCCT TAATAAAGAC GATGTCGTTA TTGGTTTAAG TTTTGCTCGC TACACAAAAA GTACCATTGA AGCGGTCGCT TTCGCCAAAG ACCGCGGCGC AAAAATTATT GTCATTACGG ACCATCTATT ATCACCGCTG GTATCGTACG GAGACGTCAC GTTATGTGCT CCGACGGAAA TGCCGTCGTT TATTGACTCG TTCGTTGCGC CGTTAAGTTT AGTTAACGCA CTCATTACCG AAGTCGGCCG GAGAAAGCGT AGCGAAGTCG AAAAGCATTT ATCTGATTTA GAAGAAATTT GGGAAAGATT CCATATTTTT TATGAGTAA
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Protein sequence | MNEVYRLIAE KLPEMSRAQR KIAKYVLNNP EAVPFFTVGK LAKMAGVSEA TVVRFATFLG FSGYPEWQQA MQESMKRQLT TVERLKISEE VYDSEDKSIF EMFQEDIERI KAMSVQIDMD LFYQAVQYIT DAKRIFIIAN RSAVSLGLFL EFYFDILFEN AELIRNPHGI SEKLFRLNKD DVVIGLSFAR YTKSTIEAVA FAKDRGAKII VITDHLLSPL VSYGDVTLCA PTEMPSFIDS FVAPLSLVNA LITEVGRRKR SEVEKHLSDL EEIWERFHIF YE
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