Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0289 |
Symbol | |
ID | 7976154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 327869 |
End bp | 328882 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644797282 |
Product | TRAP transporter solute receptor, TAXI family |
Protein accession | YP_002948482 |
Protein GI | 239825858 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAGGA AAAGATCCAT ATTGCTTACT TTATTGTGTA CAATTATGTT AATTATTGCT ACTGCTTGCA GCGGTGGCGG CAATGAAGCG AAAAATGAAA ATAAAGGAAA AAGCAGTGGG AAAAGCGGAG ATACGGTTGA CCTCTTGATG GGGACAGGAA GCCAAGGGGG TACATATTAT CCACTTGGAG CAGAAATGGC CAATGTTTGG AATAAAAATA TTAAAAGTAT CAATGTTACA TCCACTGAAT CTGGTGCCTC TGTTGAAAAC CTCGCCAAAA TTGCTAATGG AGAATTCGAT TTAGGGATGA CTGTAAACCT TCCGGCATAT GATGCTTACG AAGGAAAAGG AGATTTTAAA GGAAGAAAAG TAGAGAATTT CGCGTTTATC GGCCATATTT ATCCAGAAGT ATTGCAAATT GTGACGAGAG AAAGTTTCGG GATTAATTCT ATCGCTGATT TAAAAGGAAA ACGGATCGCA ATCGGACCGC CAGGAAGTGG TACGCAATCA GCCGCAAAAA TCGTATTAGA AGCTTTCGGT ATTAAAGACG GTGACTATGA AGCTTATCAA GAAGGCTTCG GTGATGCGAA AGCGAAGCTG CAAGACGGCA CGATTGACGC ATCGTTCGGA TTGCTTGGCC TGCCTGATGC CGGAATTGAT GAACTGCAAG CATCTGTAAA AGACGTGAAA CTTTTAGAAA TTACTGGTGA AGAACTGGCT TATGTTGAAA AGAACAGCGG CTACACTCGA TATACGATGA AAGCCGGTTC ATATGAATGG TTGAAAAAAG ATGTCAGTAC TGTTTCCGCG TTTGCGATTT TAGTCGCTAA TACAGATACA GTGGATGATG AGACAGCGTA TCAGCTTGCG AAAGTAATGA TTGAAAAAGC AAATGAAAAC ACACACCAAC AGGCAAAACA TATGACAAAA GAAAACGCAT TGAATGGACG CGGAAATTTA CCAATTCATC CAGGTGCAGA AAAATACTAT AAAGAAATTG GTATCCTTAA GTAA
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Protein sequence | MLRKRSILLT LLCTIMLIIA TACSGGGNEA KNENKGKSSG KSGDTVDLLM GTGSQGGTYY PLGAEMANVW NKNIKSINVT STESGASVEN LAKIANGEFD LGMTVNLPAY DAYEGKGDFK GRKVENFAFI GHIYPEVLQI VTRESFGINS IADLKGKRIA IGPPGSGTQS AAKIVLEAFG IKDGDYEAYQ EGFGDAKAKL QDGTIDASFG LLGLPDAGID ELQASVKDVK LLEITGEELA YVEKNSGYTR YTMKAGSYEW LKKDVSTVSA FAILVANTDT VDDETAYQLA KVMIEKANEN THQQAKHMTK ENALNGRGNL PIHPGAEKYY KEIGILK
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