Gene GWCH70_0289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGWCH70_0289 
Symbol 
ID7976154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacillus sp. WCH70 
KingdomBacteria 
Replicon accessionNC_012793 
Strand
Start bp327869 
End bp328882 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content40% 
IMG OID644797282 
ProductTRAP transporter solute receptor, TAXI family 
Protein accessionYP_002948482 
Protein GI239825858 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGGA AAAGATCCAT ATTGCTTACT TTATTGTGTA CAATTATGTT AATTATTGCT 
ACTGCTTGCA GCGGTGGCGG CAATGAAGCG AAAAATGAAA ATAAAGGAAA AAGCAGTGGG
AAAAGCGGAG ATACGGTTGA CCTCTTGATG GGGACAGGAA GCCAAGGGGG TACATATTAT
CCACTTGGAG CAGAAATGGC CAATGTTTGG AATAAAAATA TTAAAAGTAT CAATGTTACA
TCCACTGAAT CTGGTGCCTC TGTTGAAAAC CTCGCCAAAA TTGCTAATGG AGAATTCGAT
TTAGGGATGA CTGTAAACCT TCCGGCATAT GATGCTTACG AAGGAAAAGG AGATTTTAAA
GGAAGAAAAG TAGAGAATTT CGCGTTTATC GGCCATATTT ATCCAGAAGT ATTGCAAATT
GTGACGAGAG AAAGTTTCGG GATTAATTCT ATCGCTGATT TAAAAGGAAA ACGGATCGCA
ATCGGACCGC CAGGAAGTGG TACGCAATCA GCCGCAAAAA TCGTATTAGA AGCTTTCGGT
ATTAAAGACG GTGACTATGA AGCTTATCAA GAAGGCTTCG GTGATGCGAA AGCGAAGCTG
CAAGACGGCA CGATTGACGC ATCGTTCGGA TTGCTTGGCC TGCCTGATGC CGGAATTGAT
GAACTGCAAG CATCTGTAAA AGACGTGAAA CTTTTAGAAA TTACTGGTGA AGAACTGGCT
TATGTTGAAA AGAACAGCGG CTACACTCGA TATACGATGA AAGCCGGTTC ATATGAATGG
TTGAAAAAAG ATGTCAGTAC TGTTTCCGCG TTTGCGATTT TAGTCGCTAA TACAGATACA
GTGGATGATG AGACAGCGTA TCAGCTTGCG AAAGTAATGA TTGAAAAAGC AAATGAAAAC
ACACACCAAC AGGCAAAACA TATGACAAAA GAAAACGCAT TGAATGGACG CGGAAATTTA
CCAATTCATC CAGGTGCAGA AAAATACTAT AAAGAAATTG GTATCCTTAA GTAA
 
Protein sequence
MLRKRSILLT LLCTIMLIIA TACSGGGNEA KNENKGKSSG KSGDTVDLLM GTGSQGGTYY 
PLGAEMANVW NKNIKSINVT STESGASVEN LAKIANGEFD LGMTVNLPAY DAYEGKGDFK
GRKVENFAFI GHIYPEVLQI VTRESFGINS IADLKGKRIA IGPPGSGTQS AAKIVLEAFG
IKDGDYEAYQ EGFGDAKAKL QDGTIDASFG LLGLPDAGID ELQASVKDVK LLEITGEELA
YVEKNSGYTR YTMKAGSYEW LKKDVSTVSA FAILVANTDT VDDETAYQLA KVMIEKANEN
THQQAKHMTK ENALNGRGNL PIHPGAEKYY KEIGILK