| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0244 |
|---|
| Symbol | |
|---|
| ID | 7976109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 270315 |
|---|
| End bp | 271016 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 644797237 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002948440 |
|---|
| Protein GI | 239825816 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.71816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AGAAAATCCT AGTCGTTGAT GATAATGAAG ATATTTGCCT CACGATAAAA
CAATACCTTG AGCTTTATCA TTACTTTGTT GAAGCTGTTC ATAGCGGGAG TGAGGCATTA
CTACGAATTA TTAATAATAA TTTTGACTTA ATTATATTGG ATATTATGAT GGAAGGCATT
GATGGAATGG AATTGTGCAG CATGATCCGC GACAGGGTGG ATTGTCCGAT AATATTTGTG
AGTGCAAAAA CGTTGGAAGA AGACAAAATT CAAGCCCTTT CCGTGGGTGG AGATGACTAT
ATTAGCAAAC CCTTTAGCTT GAAGGAGTTA AAGGCAAGAA TAGATTGCCA TTTAAGACGG
GAAGAGCGAA TAAGATCGAA TGAAAGGCAG CTTCTGAGCT CTAAAAATAT TACTATCGAT
CTTTTGGCTA ATGAAGTTTT TTGTAAAGGT GTTAAATTAC ATTTAACAAA AAAAGAATAC
GAAATTATTA AACTATTAAT GTTGAATAAA AATATGGTTT TTTCGAAAGA GAGAATTTTT
GAAAGCGTAT GGGGATTGGA TTCAGAAAGT CAATTAGAAA CAGTTACAGA GAGCATCAAA
AACATTAGAA AGAAAATTCG TTCTCTAGAT CCGGAACATT CTTATATAAA AACACTGTAC
GGATTAGGAT ATAAATGGGA TGTGACATAT GAAAAAGGAT AA
|
|---|
| Protein sequence | MNKKKILVVD DNEDICLTIK QYLELYHYFV EAVHSGSEAL LRIINNNFDL IILDIMMEGI
DGMELCSMIR DRVDCPIIFV SAKTLEEDKI QALSVGGDDY ISKPFSLKEL KARIDCHLRR
EERIRSNERQ LLSSKNITID LLANEVFCKG VKLHLTKKEY EIIKLLMLNK NMVFSKERIF
ESVWGLDSES QLETVTESIK NIRKKIRSLD PEHSYIKTLY GLGYKWDVTY EKG
|
|---|
| |