| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0200 |
|---|
| Symbol | |
|---|
| ID | 7977943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 218730 |
|---|
| End bp | 219452 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644797178 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_002948397 |
|---|
| Protein GI | 239825773 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATGGA TCGTTTTGTT CGCTGGAGTA ATGATATTAT ACGGCATCGT TCCAACAGTT
CTTATTCGAA AAACAAATTT TCGCATTTAC CGCAAAGGAA CACAACCAGG AATGATCGCG
TTAACGTTCG ATGACGGACC CGACCCATAT TATACACCGA GACTGTTAGA TTTGTTGAAA
AAACATCAAG TGAAGGCAAC CTTTTTCGTT GTTGGGAAAA AGGCGAAGCA ATACCCTTAT
ATTGTGAAAC GAATGCATGA TGAAGGCCAT GAAATTGGGA TGCATAACTA TCGACATATA
AGCAATTGGT TTATTTTCCC TCCTTTTTTA GAAAAAGGAT TGCAAAAATC CGCGGATATT
ATTGAACAAA TTGTTGGAAC GCGGCCGATG TATTATCGTC CGCCGTGGGG GCATTTTAAT
TTGTTCACCC CGTTTTTGCA GAAAAAATAT TCGACGGTGA TGTGGACGGA CATTCTTGGC
GATTGGAATG CCAAAATTGG TACAATGGAA TTGTTTAATC GGCTGAAAAA TAGCATGAAA
GATGGAGCGG TGATTGTTCT TCATGACAGC GGGAAAACGT TTGGCGCTGA TGAATTGGCT
CCAGAACAAA TGCTTTCGGC GTTGGAATTG TTATTGAAGG AAGAAGAAGC GAAAAATATG
CGCTGGGTGA CGATTACAGA TTTGCTGAAC GAGCAAACTA ATAAACAAAT TTCATCGATA
TAA
|
|---|
| Protein sequence | MLWIVLFAGV MILYGIVPTV LIRKTNFRIY RKGTQPGMIA LTFDDGPDPY YTPRLLDLLK
KHQVKATFFV VGKKAKQYPY IVKRMHDEGH EIGMHNYRHI SNWFIFPPFL EKGLQKSADI
IEQIVGTRPM YYRPPWGHFN LFTPFLQKKY STVMWTDILG DWNAKIGTME LFNRLKNSMK
DGAVIVLHDS GKTFGADELA PEQMLSALEL LLKEEEAKNM RWVTITDLLN EQTNKQISSI
|
|---|
| |