Gene GWCH70_0180 details

Gene Information

• Locus tag: GWCH70_0180
• ID: 7977926
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacillus sp. WCH70
• Kingdom: Bacteria
• Replicon accession: NC_012793
• Strand: +
• Start bp: 197389
• End bp: 198075
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 644797161
• Product: N-acetylmuramoyl-L-alanine amidase
• Protein accession: YP_002948380
• Protein GI: 239825756
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0860] N-acetylmuramoyl-L-alanine amidase

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGAAAA TTTTTATTGA TCCGGGACAT GGCGGAAAAG ATACAGGCGC ACTTGGAAAC 
GGACTGCAAG AGAAAGATAT TACGTTGTCC ATTGCATTGG AGATGCGGCG TATATTGCAA 
AACGAATATG AAAGCGTATC TGTGCAATTA AGTCGAACAA GCGATATAGC CGTGCCGTTA 
AGCGAGCGGG CGGCTAAAGC GAACCGCTGG GGCGCCGATG TTTACGTATC GATTCATGTG 
AATGCTGGCG GAGGAACGGG GTATGAGGAT TACATTTATG AAGGACTTTC GGATCACTCA 
ACAACAGCGC GGATTCGCGA TATCATTCAC GAAGAAGTGA TACGGGCGAC AGGATTCCAT 
GATCGCGGGA AGAAGAAAGC AGACTTTTAC GTGCTAAGAG AAACGGTCAT GCCAGCGGTG 
CTTACGGAAA ACGGATTTGT CGATCGAAAA GAAGATGCGG AAAAGTTGAA AGACCCTGCG 
TTTCTTCAAA AGATCGCAAG AGGGCATGTG AATGGGTTAG AGAAAGCTTT TCATTTAACG 
AAAAAGTCGG ATTCGAACGA TTTGATTCGT GTCATTGTTG ATGGAAAGCA AATCGGTGCC 
TATGAGAAAA AAGAAAATGT ATTGAAACAA GTTGAGTACT ATTTAGGAAA GGCTAATAAA 
ATCGAGTTGG AACGAGTGAA AAGATAA 

 

Protein sequence

MLKIFIDPGH GGKDTGALGN GLQEKDITLS IALEMRRILQ NEYESVSVQL SRTSDIAVPL 
SERAAKANRW GADVYVSIHV NAGGGTGYED YIYEGLSDHS TTARIRDIIH EEVIRATGFH 
DRGKKKADFY VLRETVMPAV LTENGFVDRK EDAEKLKDPA FLQKIARGHV NGLEKAFHLT 
KKSDSNDLIR VIVDGKQIGA YEKKENVLKQ VEYYLGKANK IELERVKR