| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0157 |
|---|
| Symbol | |
|---|
| ID | 7979285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 174723 |
|---|
| End bp | 175958 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644797143 |
|---|
| Product | YbbR family protein |
|---|
| Protein accession | YP_002948362 |
|---|
| Protein GI | 239825738 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4856] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00141391 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGT TAATGAACAA TCATTGGTTT ATTAAAATAT TTTCTTTACT GTTAGCGATT
ATGCTTTATA TGTCGGCGAA TATTGAGAAA GAAACAAAAT CGGGAGTGAT TACCCGCAAT
ACGGTAGGAC AAGAGGATAC GGAAACAATG ACAAATGTTC CTGTAGTGGT TTATTATGAT
GAGGAAAATT TAGTTGTCTC CGGTATTCCA AAATATGTGA ATGTCACTTT GCAAGGGCCC
GCAAGTATTG TTAAGCCGAC TGCTTTACAG CGCAATTTTG AAGTGTATAT CGACTTAACG
AATTTACCAT TAGGAACGTA TACCGTTCCA ATTAAATATA AAGATATATC TGATAAACTA
AAGGTCAACA TCCACCCTTC AGTCGCAAAA GTAACGATTC AAGAAAAAGT TTCTAAAAAT
TTCCCTGTCG GGGTTGATTT GATCAATAAA AATAAAGTGC CCGAAGGCTA TTTGATTGAA
AAGCCGATTG TCAAACCAAA CGCCGTTACT ATTACGGGTG CCAAAGAATT AATTGAAAGT
ATATCATCGG TAAAAGCTAG AATTGATTTA GATAGGGCAA CAGATACCGT AACAGAGGAA
TCGAGCGTAA CCGTTTATGA CAAAAGAGGC AACGTACTTA ATGTAGATGT CCAGCCTTCC
GTAGTAGAAG TAACCGTTCC GATTAAAAGC CCAAGCAAAA CGGTTCCACT GAAAATTAAT
CGGACAGGAT CACTGCGAAA AGGATTAAGT ATAGTAAAAA TAGAAACCAT CCCAAATCAA
GTAACTATTT TTGGCTCAAA AGAAAAAATC AATTCCATTG AATTTATTGA CGGTATTACG
ATTCATTTAG ATGAAATTAC AGAAGATAAG ACATTGGAAG TGAATGTTCC GTTGCCTGCA
GGAGTAAAAA GTGTGGATCC TTCTAAAATA AAAATAGTCA TTGATGTACA AAAAGAAGAA
TCGAAAACAT TAAAAGATGT ACCGATTCAT GTAGTAGGAT TAGGAGATCA ATATACGGTT
GATTTTGTAG ATCTGCAAGA AGGGGCGATG GATGTTCAGC TTTATGGGGC ACCGAATGTA
TTAAGCGATA TAACAAAAGA CGATATTCAA TTATATATAG ATGTTAGTGA TTTAGGCGTT
GGTGAACATG AAGTAAAAGC GGAATTAAAT GGTCCACAAA ATATCAAATG GCAATTACCG
AAAGAAAAAG TAAAAATTAA AATTAATGAA CGATAA
|
|---|
| Protein sequence | MDKLMNNHWF IKIFSLLLAI MLYMSANIEK ETKSGVITRN TVGQEDTETM TNVPVVVYYD
EENLVVSGIP KYVNVTLQGP ASIVKPTALQ RNFEVYIDLT NLPLGTYTVP IKYKDISDKL
KVNIHPSVAK VTIQEKVSKN FPVGVDLINK NKVPEGYLIE KPIVKPNAVT ITGAKELIES
ISSVKARIDL DRATDTVTEE SSVTVYDKRG NVLNVDVQPS VVEVTVPIKS PSKTVPLKIN
RTGSLRKGLS IVKIETIPNQ VTIFGSKEKI NSIEFIDGIT IHLDEITEDK TLEVNVPLPA
GVKSVDPSKI KIVIDVQKEE SKTLKDVPIH VVGLGDQYTV DFVDLQEGAM DVQLYGAPNV
LSDITKDDIQ LYIDVSDLGV GEHEVKAELN GPQNIKWQLP KEKVKIKINE R
|
|---|
| |