Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0147 |
Symbol | |
ID | 7977540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 157532 |
End bp | 158239 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644797121 |
Product | N-acetylmuramoyl-L-alanine amidase CwlD |
Protein accession | YP_002948353 |
Protein GI | 239825729 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0117545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTAA AATGGTTGGG TGCTCTCATT ATTTCCATTA TTGTTATTGT TCTTTTCCAA TATATCTTTG CGAATACGAC TTCAACTAAA TCGTGGAACC TCCCTCTCTC TGGAAGGATT ATCATTTTAG ATCCTGGTCA TGGCGGGCCG GACGGAGGAG CTGTCGGCGG TGATGTGGTA GAAGAAGAAG TGACGCTGAA AGTGGCGGAG AAATTGCGAG ACTACTTGCA GCAGCAAGGT GCGCTCGTGT TGATGACAAG GGAAACGGAC AGCGACCTTG CCGATAAAGA CACACGTGGC TATAGCCGTC GAAAGGCGGA AGATTTACGA AAACGTGTTG CGTTGATTAA TAAATCGGAG GCAGATTTAT TTATTAGTAT CCATCTTAAT GCCATTCCCT CTCCGCGTTG GCGTGGGGCG CAAACGTTTT ATTACGGCTC GCTGATCGAA AATGAACGGA TCGCTAAGTT TATCCAAGCG GAATTGCGAC GCAATCTTGA AAATACAAAT CGTACTGCCA AAATAATCGA TACCGTTTAT TTGTTGAAAT ATGCGAAAAA ACCAGGTGCG CTTGTCGAAG TGGGGTTTTT ATCTAATCCA GAGGAACGGG AACTTTTAGC TTCTGATCGT TATCAAACGA AGCTAGCGGC ATCGATATAT AAAGGGGTAC TGCGATATTT TTCGAATGAA AAAAATCCTC CTGAATAG
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Protein sequence | MKVKWLGALI ISIIVIVLFQ YIFANTTSTK SWNLPLSGRI IILDPGHGGP DGGAVGGDVV EEEVTLKVAE KLRDYLQQQG ALVLMTRETD SDLADKDTRG YSRRKAEDLR KRVALINKSE ADLFISIHLN AIPSPRWRGA QTFYYGSLIE NERIAKFIQA ELRRNLENTN RTAKIIDTVY LLKYAKKPGA LVEVGFLSNP EERELLASDR YQTKLAASIY KGVLRYFSNE KNPPE
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