| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0143 |
|---|
| Symbol | truA |
|---|
| ID | 7977538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. WCH70 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012793 |
|---|
| Strand | + |
|---|
| Start bp | 155158 |
|---|
| End bp | 155904 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644797117 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_002948349 |
|---|
| Protein GI | 239825725 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000160558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAC GGATCAAATG CACGCTTTCC TATGACGGTA CACATTTTTT CGGTTACCAA
ATTCAGCCTG GCAAACGAAC GGTGCAAGGC GAGTTAGAAC GAGTGCTCGA ACAAATGCAT
AAAGGGAAAG CGATTCGTGT TACTGCTTCA GGAAGGACAG ATGCGGGTGT TCATGCATAC
GGGCAAGTAA TTCATTTCGA TACGTTCTTA TCGCTTTCTC CAGATCAATG GAAAAAAGCA
TTAAATGCCC AGTTACCGGA TGATATAGTG ATTAAAGATG TACAAGAAGC AGATCCTTCT
TTTCATGCGC GTTTTAGTGC CAAAGCAAAA GAATATCGAT ATAAAGTACG AATTGCCCAA
GAACGTGACG TATTTTTACG TAATTATTGC TATCATTACC CTTATCCACT TGATATGGAA
GCGATGAGAC ATGCATTGCG ACTTATAGAG GGCACGCATG ACTTTACTAG CTTTTGTTCA
GCAAAGACGG ATGTTGATGA TCGTGTACGC ACGATTTATA AAGCAGATAT GGCGATGCAT
GATGATTTAT TGGAATTTTG CTTTATTGGC AACGGGTTTT TATATAATAT GGTGCGGATT
ATCGTTGGAA CGATTTTGGA AGTTGGGCAA GGAAAACGGA GTATAGATAG CATCTCACAC
GCTTTTGAGG CAAAAGATCG CCAGTTTGCT GGCAAAACGG CTCCACCGCA AGGATTATAT
TTATGGAAAG TATATTATGA CAACTAG
|
|---|
| Protein sequence | MSKRIKCTLS YDGTHFFGYQ IQPGKRTVQG ELERVLEQMH KGKAIRVTAS GRTDAGVHAY
GQVIHFDTFL SLSPDQWKKA LNAQLPDDIV IKDVQEADPS FHARFSAKAK EYRYKVRIAQ
ERDVFLRNYC YHYPYPLDME AMRHALRLIE GTHDFTSFCS AKTDVDDRVR TIYKADMAMH
DDLLEFCFIG NGFLYNMVRI IVGTILEVGQ GKRSIDSISH AFEAKDRQFA GKTAPPQGLY
LWKVYYDN
|
|---|
| |