Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0123 |
Symbol | rplE |
ID | 7979279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 143581 |
End bp | 144120 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644797097 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_002948329 |
Protein GI | 239825705 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACCGCC TAAAAGAGAA GTATTTAAAA GAAGTGACTC CTGCTTTAAT GAGCAAGTTC AACTATAAAT CTATAATGCA AGTTCCAAAA ATCGAAAAAA TCGTCATCAA CATGGGTGTT GGTGATGCGG TACAAAATCC AAAAGCACTT GATAGTGCTG TAGAAGAATT AACATTAATC GCTGGTCAAA AACCGGTTGT AACTCGTGCG AAAAAATCAA TCGCTGGATT CCGTCTTCGC GCTGGAATGC CAATCGGTGC GAAAGTGACA TTGCGTGGAG AACGCATGTA TGATTTCTTA GACAAACTTA TTTCTGTATC TCTTCCGCGT GTTCGTGATT TCCGTGGAGT ATCGAAAAAG TCGTTTGATG GTCGCGGTAA CTATACGTTG GGAATTAAAG AACAATTGAT TTTCCCTGAA ATTGATTACG ATAAAGTAAA TAAAGTTCGC GGTATGGATA TCGTTATTGT TACTACAGCG AAAACGGACG AAGAGGCTCG TGAACTATTA ACATTACTCG GTATGCCATT CCAAAAATAA
|
Protein sequence | MNRLKEKYLK EVTPALMSKF NYKSIMQVPK IEKIVINMGV GDAVQNPKAL DSAVEELTLI AGQKPVVTRA KKSIAGFRLR AGMPIGAKVT LRGERMYDFL DKLISVSLPR VRDFRGVSKK SFDGRGNYTL GIKEQLIFPE IDYDKVNKVR GMDIVIVTTA KTDEEARELL TLLGMPFQK
|
| |