| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GWCH70_0103 |
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| Symbol | rpoB |
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| ID | 7977502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacillus sp. WCH70 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012793 |
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| Strand | + |
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| Start bp | 125172 |
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| End bp | 128729 |
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| Gene Length | 3558 bp |
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| Protein Length | 1185 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644797077 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_002948309 |
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| Protein GI | 239825685 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000686573 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAGGCC GACTAGTTCA ATATGGACGA CACCGCCAAC GAAGAAGTTA CGCGCGTATT
AGTGAAGTGC TAGAATTGCC AAATCTTATT GAGATTCAGA CTTCCTCTTA TAAATGGTTT
CTTGATGAAG GATTGCGGGA AATGTTTAAA GAAATTTCCC CGATTGAAGA CTTTTCCGGT
AATCTTTCTC TTGAGTTTAT TGATTATAGT TTAGGGGAGC CAAAATATAC TGTTGAAGAG
GCAAAAGAAC GCGATGTTAC ATATGCCGCA CCACTTCGCG TAAAAGTACG TTTAATTAAT
AAAGAGACTG GTGAAGTAAA AGAACAAGAT GTTTTTATGG GCGATTTTCC GTTAATGACA
GAAACAGGAA CGTTTATCAT TAACGGGGCG GAACGTGTTA TTGTGTCACA GCTTGTCCGC
TCTCCAAGCG TTTATTATAG TGAAAAGGTT GATAAAAACG GAAAACGCGG TTATTCGGCA
ACGGTTATTC CGAACCGCGG CGCGTGGTTA GAATACGAAA CAGACGCAAA AGATGTTGTA
TATGTCCGTA TTGATCGCAC TCGTAAACTA CCAGTTACGG TGCTTCTTCG TGCGCTCGGG
TTTGGTTCCG ATCAGGAAAT TATCGATTTA ATCGGTGATA ATGAATATCT TCGCAACACG
CTTGAAAAAG ATAATACGGA TAGCACTGAA AAAGCGCTCA TTGAAATTTA CGAGCGTTTG
CGTCCAGGTG AACCACCGAC GATTGAAAAC GCGAAAAATT TGTTAATCTC CCGCTTTTTT
GATCCAAAAC GTTATGACTT AGCAAGCGTT GGACGTTATA AAATTAACAA AAAACTTCAT
ATTAAAAACC GTCTGTTTAA CCAACGTCTT GCCGAAACAT TGGTAAATCC GGAAACTGGT
GAAATCATTG CGGAAAAAGG AACGCTTATT GATCGAAGAA CGTTAAATCG AATTTTACCG
TACCTTGAAA ACGGCGTTGG ATTACAAGTT TATAAACCTG TCGGTGGCGT AGTGGATGAA
GAATTTGCGT TACAGTCTAT TAAAATTTAT TCACCAAACG ACGCGGATGG AGAAAAAGTT
ATTAATGTCA TCAGCAACGG CTATATTGCC GAAGATGTGA AACATATTAC TCCTGCGGAT
ATTATTGCTT CGATTAGCTA TTTCTTTAAC TTATTACACG GAGTCGGTGA CACGGATGAT
ATTGACCATT TAGGAAATCG CCGTCTTCGT TCTGTCGGTG AATTATTGCA AAACCAATTC
CGGATTGGCT TGTCACGCAT GGAGCGGGTG GTTCGTGAGC GCATGTCCAT TCAAGATATA
AACACGATCA CTCCGCAACA GCTGATTAAC ATTCGTCCTG TCATTGCAGC GATTAAAGAG
TTTTTCGGAA GCTCACAGCT TTCACAATTT ATGGACCAAA CGAACCCGCT TGCTGAATTG
ACGCATAAAC GCCGCCTTTC TGCGTTAGGA CCGGGTGGTT TAACTCGTGA ACGCGCAGGT
TTCGAGGTGC GTGACGTTCA CTATTCACAC TATGGACGAA TGTGCCCGAT TGAAACACCT
GAAGGTCCAA ACATTGGGTT GATCAACTCA CTATCTACGT ATGCAAAAGT AAATAAATTT
GGTTTTATCG AAACGCCATA TCGACGTGTC GATCCGGAGA CAGGAAGAGT TACCGATCAA
ATTGATTATT TAACAGCCGA TGAAGAAGAT AACTATGTTA TAGCACAAGC GAACGTCCCT
CTAGCGGAAG ATGGAACGTT CTTAGAAGAA AATGTAGTTG CTCGTTTCCG CGGGGAAAAC
ATTGTCGTAA AACGCGACCG CGTCGACTAT ATGGACGTAT CGCCAAAACA AGTTGTATCA
GCAGCGACGG CCTGCATTCC ATTTTTGGAA AACGACGACT CGAACCGTGC GCTTATGGGA
GCGAACATGC AGCGTCAAGC AGTTCCATTG TTAGAGCCAG AAGCGCCAAT TGTCGGTACA
GGAATGGAAT ATGTGTCCGC AAAAGACTCC GGTGCCGCTG TTATTTGTAA ACATCGCGGC
ATTGTCGAAC GAGTGGAGGC AAAGGAAATT TGGGTTCGCC GCCTCATTGA AGTGGACGGA
AAAGAAGTAA AAGGTGATCT TGATAAATAT CGTCTTTTGA AATTCGTTCG TTCGAACCAA
GGGACTTGTT ACAATCAACG CCCGATTGTG AAAAAAGGCG ATATCGTTGA AAAAGGAGAA
ATTTTAGCAG ATGGTCCATC CATGGATAAA GGTGAGCTTG CACTCGGCCG CAACGTACTG
GTTGCCTTTA TGACATGGGA TGGATACAAC TATGAAGACG CGATTATCAT GAGCGAACGT
CTTGTCAAAG AAGACGTATA TACGTCCATC CATATCGAGG AGTATGAAGC AGAATCCCGT
GATACAAAAC TTGGTCCGGA AGAAATCACG CGCGATATTC CAAACGTCGG TGAAGACGCG
CTACGGAACT TGGACGAACG TGGAATTGTC CGCATTGGCG CGGAAGTAAA AGACGGTGAT
TTGCTCGTTG GTAAAGTAAC ACCGAAAGGA ATGACGGAGC TTACAGCAGA AGAACGGCTG
TTACATGCTA TTTTCGGTGA GAAAGCGCGC GAGGTGCGTG ATACGTCTCT TCGAGTTCCG
CATGGTGGCG GCGGTATTGT CCTTGATGTG AAGGTCTTTA ACCGCGAGGA CGGAGATGAG
CTTCCGCCAG GTGTTAACCA GCTTGTCCGT GTTTATATCG TGCAAAAACG GAAAATTTCC
GAAGGCGATA AAATGGCAGG ACGCCATGGA AACAAAGGGG TTATTTCGCG AATTTTACCG
GAAGAAGATA TGCCGTTCTT ACCAGACGGT ACTCCAATTG ATATTATGTT AAACCCTTTA
GGCGTTCCGT CGCGTATGAA TATCGGGCAA GTGTTCGAAT TGCATCTCGG TATGGCAGCG
AAGAAGCTCG GCCTCCATAT TGCATCGCCA GTATTTGATG GGGCTATGGA AGAAGACGTA
TGGAACATTT TAGAAGAAGC AGGAATGCCG CGTGACGCAA AAACGGTTTT ATACGATGGC
AGAACGGGTG AGCCGTTTGA TAACCGCGTA TCTGTCGGTA TTATGTACAT GATTAAGCTT
GCTCACATGG TTGACGATAA GCTTCATGCC CGTTCAACGG GACCGTACTC GCTCGTTACG
CAGCAACCAC TTGGCGGTAA AGCGCAATTT GGCGGGCAGC GCTTCGGCGA AATGGAAGTG
TGGGCGCTCG AAGCTTATGG CGCTGCATAT ACATTGCAAG AAATACTTAC AGTCAAATCG
GACGATGTCG TCGGTCGTGT GAAAACATAT GAAGCAATCG TCAAAGGTGA GAACATACCA
GAACCAGGTG TGCCGGAATC GTTTAAAGTG TTGATTAAAG AGCTGCAAAG CTTAGGTATG
GATGTAACCA TTTTGACTAG CGACGAAAAA GAAATTAATA TGGAAAACTT TGATGAAGAT
GATGATCATA GTGCGGATGC CATTGTTCCA GAAGTGAAGT CGACAGAGAA CGAAAAAGAT
GTTGTCACAA AAGAATAA
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| Protein sequence | MTGRLVQYGR HRQRRSYARI SEVLELPNLI EIQTSSYKWF LDEGLREMFK EISPIEDFSG
NLSLEFIDYS LGEPKYTVEE AKERDVTYAA PLRVKVRLIN KETGEVKEQD VFMGDFPLMT
ETGTFIINGA ERVIVSQLVR SPSVYYSEKV DKNGKRGYSA TVIPNRGAWL EYETDAKDVV
YVRIDRTRKL PVTVLLRALG FGSDQEIIDL IGDNEYLRNT LEKDNTDSTE KALIEIYERL
RPGEPPTIEN AKNLLISRFF DPKRYDLASV GRYKINKKLH IKNRLFNQRL AETLVNPETG
EIIAEKGTLI DRRTLNRILP YLENGVGLQV YKPVGGVVDE EFALQSIKIY SPNDADGEKV
INVISNGYIA EDVKHITPAD IIASISYFFN LLHGVGDTDD IDHLGNRRLR SVGELLQNQF
RIGLSRMERV VRERMSIQDI NTITPQQLIN IRPVIAAIKE FFGSSQLSQF MDQTNPLAEL
THKRRLSALG PGGLTRERAG FEVRDVHYSH YGRMCPIETP EGPNIGLINS LSTYAKVNKF
GFIETPYRRV DPETGRVTDQ IDYLTADEED NYVIAQANVP LAEDGTFLEE NVVARFRGEN
IVVKRDRVDY MDVSPKQVVS AATACIPFLE NDDSNRALMG ANMQRQAVPL LEPEAPIVGT
GMEYVSAKDS GAAVICKHRG IVERVEAKEI WVRRLIEVDG KEVKGDLDKY RLLKFVRSNQ
GTCYNQRPIV KKGDIVEKGE ILADGPSMDK GELALGRNVL VAFMTWDGYN YEDAIIMSER
LVKEDVYTSI HIEEYEAESR DTKLGPEEIT RDIPNVGEDA LRNLDERGIV RIGAEVKDGD
LLVGKVTPKG MTELTAEERL LHAIFGEKAR EVRDTSLRVP HGGGGIVLDV KVFNREDGDE
LPPGVNQLVR VYIVQKRKIS EGDKMAGRHG NKGVISRILP EEDMPFLPDG TPIDIMLNPL
GVPSRMNIGQ VFELHLGMAA KKLGLHIASP VFDGAMEEDV WNILEEAGMP RDAKTVLYDG
RTGEPFDNRV SVGIMYMIKL AHMVDDKLHA RSTGPYSLVT QQPLGGKAQF GGQRFGEMEV
WALEAYGAAY TLQEILTVKS DDVVGRVKTY EAIVKGENIP EPGVPESFKV LIKELQSLGM
DVTILTSDEK EINMENFDED DDHSADAIVP EVKSTENEKD VVTKE
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