Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GWCH70_0056 |
Symbol | |
ID | 7978494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacillus sp. WCH70 |
Kingdom | Bacteria |
Replicon accession | NC_012793 |
Strand | + |
Start bp | 67174 |
End bp | 67782 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644797016 |
Product | spore cortex biosynthesis protein YabQ |
Protein accession | YP_002948264 |
Protein GI | 239825640 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02893] spore cortex biosynthesis protein YabQ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000043897 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTTTAA CGACGCAGCT GGCGACAATG CTGGCGATGA TCGGAATGGG CAGCTGGCTT GGCGCCGCGC TCGATACGTA TAACCGCTTT TTAAAACGAC AGGACCGCGC CCATTGGATC GTTTTTATTA ATGATATTTT ATTTTGGATT GTTCAAGGTT TGATTATTTT TTACGTTTTA CTGCTCGTCA ATGAAGGCGA GCTGCGCTTT TATATTTTTC TAGCGATTTT ATGTGGATAT GCTGCTTATC AAAGTTTGTT TCGTATGATA TATTTAAAAG TGCTTGAATG GACGATTTGG TTTGCGGTGC GGTTATACCG CTTTTTTGTT CAGTTGTGCT ATTATTCCAT CGTTCGCCCG ATTCAATTGC TTTTTCAAAT ATTATTGGCA CTTTCGTTTT TTGTATGGAA ATTGTTTTCC TCTTTCCTTC ATATTTTGTA TCAATGTGTA AAGATATTAT TTGCTCCGGT TCGCTGGATT GGCTTTATGA TTTGGAGAGG AATTCCAAAA CATTGGAAAC AGCCGCTAGA AAAAATTTTC AGCTATTTAG CAGGAATTAT TCGCCAAGTG AAGAATATGA AAGATAGTTT CATAAAACGG CGAAAGTAA
|
Protein sequence | MSLTTQLATM LAMIGMGSWL GAALDTYNRF LKRQDRAHWI VFINDILFWI VQGLIIFYVL LLVNEGELRF YIFLAILCGY AAYQSLFRMI YLKVLEWTIW FAVRLYRFFV QLCYYSIVRP IQLLFQILLA LSFFVWKLFS SFLHILYQCV KILFAPVRWI GFMIWRGIPK HWKQPLEKIF SYLAGIIRQV KNMKDSFIKR RK
|
| |