| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6375 |
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| Symbol | |
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| ID | 7975697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1121460 |
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| End bp | 1123247 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644796942 |
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| Product | Chloride channel core |
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| Protein accession | YP_002948201 |
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| Protein GI | 239821016 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCAGA TCGACTCTTC CCGAACAGCC ATGACTCCAG TCCCCCACCC GCCCCGCGGC
GACTTCGCCC TCAATGCGCG CCTGCTGCGC ATCACTGTCA TGGCCATCGT GGTCGGGGCG
GTCAGCACCG TGGCCGCGCG CGTGCTGCTC GACCTGATCC GCTTCTTCAC CAACCTGTTC
TTCTTCCAGA CCTTCTCGCT GGCGGACCGC TCGCCGGCCG GGCACACGCT GGGCGCCTGG
GTCATTGCGG TGCCGGTGAT CGGCGGGCTG ATCGTGGGGC TGGTCGCGCG CTACGGCTCC
GACAAGATCC GCGGCCACGG CATTCCCGAG GCGATCGAGG CGATCCTGTT CGGCAAGAGC
AAGATGTCGC CGAAGGTCGC GCTGCTCAAG CCGCTGTCCT CGGGCATCGT GATCGGCAGC
GGCGGCCCGT TCGGCGCCGA AGGGCCGATC ATCATGACCG GCGGCGCCAT CGGCTCGCTG
ATTGCGCAGC ACTTCCATCT CACGGCCGCG GAGCGCAAGG CGCTGCTGGT GGCCGGCGCC
ACCGCGGGCA TGACGGCGGT GTTCGGCACG CCCGTGGCCG CCGTGCTGCT GGCGGTGGAA
CTGCTGCTGT TCGAGCTCCG GCCGCGCAGC CTGCTGCCGG TGGCCGTGGC CTGCGCGGTG
GCGGGGTTCA CACGTCCGCT GCTGATGGAT GCGGGCCCGC TGTTTCCGCT GCAGACCGCG
GTGCCCGGCC CGCTCGCGAT GCTCTCGTGC GTGGCCGCGG GGCTTCTGTG CGGCGCATTG
TCGGCCTCGC TCTCGATCTC GCTCTACAAG GTCGAAGACC TGTTCGGCAA GCTGCCGATC
CACTGGATGT GGTGGCCGGC GATCGGCGGC CTGGCGGTGG GCATCGGCGG CTACTTCGAG
CCGCGTGCAT TGGGCGTGGG CTACGACGTG ATCGGCGACC TGCTGCACAA CCACCTGGCG
CTCGGCGTGG TGGCCGCGCT GCTCGCGGTG AAGGCGGTGA TCTGGGTGAT CTCGCTGGGC
TCGGGCACTT CGGGCGGCGT GCTCGCGCCG CTCCTGATGA TGGGCGCGGG CCTGGGCGTG
GTGCTCTCGC ACGTGCTGCC CGGCAACGAC CCGATGCTGT GGCCGCTGGT CTGCATGGCC
GCCACGCTGG GCGGCGTGAT GCGCGCGCCG CTCACCGCCA CCATCTTCGC CTTCGGGCTC
ACGCACGACA GCAATGCGCT GCTGCCGCTG CTGACTACCT CCGCCGTGGC CTACGGCTTC
ACGGTGCTGA CCATGCGCCG CTCGATCCTC ACCGAAAAGA TCGCGCGCCG CGGCTATCAC
ATCTACCGCG AATACGGCGT CGATCCGCTC GAGCGGCACT CGGTGGAGGA GGTCATGACG
CGCGAGGTGC GCAGCATCGA CGCGGCCCTG CCGGTGGCGC GGGCGCTGTT CGAGCATTTC
GGCGACGGCC AGGCCCACCG TGCGTTCCCG GTGGTGCGCA ACGGCACGGT GATCGGCGTG
GCGGACCGCG CGATGCTGGC GGCGTGCGGC ACGCGCGATC CCATTGCCAC CGTGGGCGAC
GCGTGCGCCG ACGTGCCGCT GTTCTTTGCG CTGCCGGGCG AGAACTGCCG CGCGGTGGCC
ACGCGGCTCG CGCGCCATCG GCTCGAGCGG CTGCCCGTGG TGAAGGACGC GCAGTCGCTG
GTGCTGGTGG GCATCGTGGC GCGCAGCGAC CTGATCAAGC CTTCGCTCGC GCACTTCGAC
GAGGAAGAAA AGCGCGAGCG GATGCGCGGG CTGCCGTGGC AGGCCTGA
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| Protein sequence | MRQIDSSRTA MTPVPHPPRG DFALNARLLR ITVMAIVVGA VSTVAARVLL DLIRFFTNLF
FFQTFSLADR SPAGHTLGAW VIAVPVIGGL IVGLVARYGS DKIRGHGIPE AIEAILFGKS
KMSPKVALLK PLSSGIVIGS GGPFGAEGPI IMTGGAIGSL IAQHFHLTAA ERKALLVAGA
TAGMTAVFGT PVAAVLLAVE LLLFELRPRS LLPVAVACAV AGFTRPLLMD AGPLFPLQTA
VPGPLAMLSC VAAGLLCGAL SASLSISLYK VEDLFGKLPI HWMWWPAIGG LAVGIGGYFE
PRALGVGYDV IGDLLHNHLA LGVVAALLAV KAVIWVISLG SGTSGGVLAP LLMMGAGLGV
VLSHVLPGND PMLWPLVCMA ATLGGVMRAP LTATIFAFGL THDSNALLPL LTTSAVAYGF
TVLTMRRSIL TEKIARRGYH IYREYGVDPL ERHSVEEVMT REVRSIDAAL PVARALFEHF
GDGQAHRAFP VVRNGTVIGV ADRAMLAACG TRDPIATVGD ACADVPLFFA LPGENCRAVA
TRLARHRLER LPVVKDAQSL VLVGIVARSD LIKPSLAHFD EEEKRERMRG LPWQA
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