| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6368 |
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| Symbol | |
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| ID | 7975690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1116770 |
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| End bp | 1117522 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796935 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002948194 |
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| Protein GI | 239821009 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.175795 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCTTCT CCGACTACAA GACCGCGCTG GTGACGGGGG CCTCCTCGGG CATCGGTGCC
GCCGTCGTCG AGCGCCTCTG CAAGGAAGGC CTCCAGGTCC ACGCGCTGGC GCGCAGCGCC
GGCAAGCTGG CCGAACTGGC CGCGCGCACC GGCTGCATCC CGCATGCCAT CGACGTGAGC
GACCTGGCCG GCATCACCCG CCTCACGCAG GAGGTGGCAT TCGACGTGCT GGTCAACAAC
GCCGGCGTCG ACCGCCCCGG CTCCATCCTC AAGGCCGATG CCGAGGGCAT CGACCTGCTG
ATCGACGTGA ACCTGCGCGC CGTGCTGCAC CTGTGCCGGC TCGTGGTGCC CGGCATGGCC
GCGCGCGACC GGGGCCACGT GGTCAACATC AGCTCCATTG CCGCGGCCTA CAACTTCGGC
GGCAACAGCA CCTACCACGC GACCAAGGCG GCCGTGAGCA TGCTGTCGCG CCAGCTGCGC
ATCGACGTCT TCGGCAAGCG CGTGCGCGTG ACCGAGATCT GCCCGGGGCG CGTGGCCACC
GACATCTTCG CGCACGTGCA CGGCGACTCC GAAGAAACCC ACAAGCGCTT CGTCGAAGGC
TACGAGCTGC CGCAGGCCGA GGACATCGCC AATGCCATCG CCTTCGCGAT TGCGGCGCCC
ATCGCGGTCA ACGTGGGCCA CATGGAAATC ACGCCCACGC TGCAGGTGCC CGGCGGGCTC
TCGACCGCGC GTCCGGAAGC GCCGCAGGCC TGA
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| Protein sequence | MPFSDYKTAL VTGASSGIGA AVVERLCKEG LQVHALARSA GKLAELAART GCIPHAIDVS
DLAGITRLTQ EVAFDVLVNN AGVDRPGSIL KADAEGIDLL IDVNLRAVLH LCRLVVPGMA
ARDRGHVVNI SSIAAAYNFG GNSTYHATKA AVSMLSRQLR IDVFGKRVRV TEICPGRVAT
DIFAHVHGDS EETHKRFVEG YELPQAEDIA NAIAFAIAAP IAVNVGHMEI TPTLQVPGGL
STARPEAPQA
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