| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6364 |
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| Symbol | |
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| ID | 7975686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 1113409 |
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| End bp | 1114077 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644796931 |
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| Product | Allophanate hydrolase subunit 1 |
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| Protein accession | YP_002948190 |
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| Protein GI | 239821005 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1 |
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| TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.21123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGC AACGGCCATC GATCAGCCTG CTGGGCACGA CCGCGCTGAT CTTCGAGGCG
CCCGGCGAGA TGAACCTCGA CTCGCAGCAG CGCATCTGGG CGCTGGCGCA CGAGACCCAG
GCCTGGCCGG AGATCCGCGA AGCCGTGCCG GGCATGAACA ACCTGATGCT GGCCTTCCTG
CACCCGCCGC GCGGCGCCGG CGCGCTCCAA GCCCTGGAGG CGCGCCTGCA CGATGCGTGG
GACGCGGCCG TCGCGCTGCC GCGCGAAGGC CGGGTGGTCG AGCTGCCCGT GGTCTACGGC
GGCCCAGGCG GCCCGCACAT GGCCGACGTG GTGGCGCACA CGGGCCTGAG CATCGAGCGC
ATCGTCGAGC TGCACAGCGC GCCGCTCTAC CCGGTGTACG CGCTCGGCAG CCATCCGGGC
TACTGCTACC TGGGCGGCAT GGACGCGCGC ATTGCCACGC CGCGCCGCAA GGTGCCGGTG
CTGAGCATCC CGGGCGGCGC GGTGTCGATC GGCGGCGCGC AGACCGGCGT CTCGGCCTCG
GCCGGGCCCA GCGGCTGGAA CACCATCGGC AGCACCTCGA TGTGCTTCTT CGATCCCGCG
CAGGACCCGC CCGCGGCGCT GCAGCCGGGC GACATGATCC GTTTTCGCGT GGAGGGCATC
GTCCGATGA
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| Protein sequence | MIAQRPSISL LGTTALIFEA PGEMNLDSQQ RIWALAHETQ AWPEIREAVP GMNNLMLAFL
HPPRGAGALQ ALEARLHDAW DAAVALPREG RVVELPVVYG GPGGPHMADV VAHTGLSIER
IVELHSAPLY PVYALGSHPG YCYLGGMDAR IATPRRKVPV LSIPGGAVSI GGAQTGVSAS
AGPSGWNTIG STSMCFFDPA QDPPAALQPG DMIRFRVEGI VR
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