| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6346 |
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| Symbol | |
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| ID | 7975668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1080760 |
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| End bp | 1082598 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644796914 |
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| Product | peptidase S15 |
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| Protein accession | YP_002948173 |
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| Protein GI | 239820988 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2936] Predicted acyl esterases |
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| TIGRFAM ID | [TIGR00976] putative hydrolase, CocE/NonD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGACC GCGATAGCAC GCCAGGCGCC TGGCACCTGC CGCCCAGCGC CTACCTTGCC
AGCCGCAAGC CCGCCTTCGG CCTGCCCGGG CGGCCGGAGT CGCTCTACGT CACGATGCGC
GATGGCTGCC GCATCGCGCT CGACTATTAC CTGCCCCAGG CGAGCAACGG CGCGCAGCCG
CCGGCCCGCC TGCCCACCCT CGTCATCTTC ACGCCCTACT ACCGGCGCTT CGTGACCACC
GACCCTACGG TGGAGGCCAG TCCCAACTGC GGCCGCTACC GCGACTTCTT CGTGCCGCAT
GGCTACGCGG TGGTGGTGGT GGACGTGCGG GGCACCGGCG CGAGCTTTGG CACGCGCGAC
GCATTGCGCT CGCCGAAGGA GCGCGACGAC TACCACGAGA TTGCCGAGTG GATCGTGCAG
CAGCCCTGGA GCGACGGGCG CATCGGCTCG ACCGGCATTT CGTACCTGGG CGCGGCGGCG
GTGTTCCTCG CGAGCACGCG GCATCCCGCG GTCAAGGCCA TCGCACCGCT GTTCGCCGTC
ACCGACATCT ACACCGACCA GCTCTACGTG GGCGGCGTGC TCTCGACCAT CTGGACCGGC
CGCTACGACG AACTGATGGT CGCGCTCGAC CAGGACGACC GCCCTGCCCT TGCCAAGTTC
GCGTACTACG GCAACCCGCT GTTCGCGGGG CCGCAGCCGG TGGACGCCGA TGCCGATGGC
CGGCTGCTGG CCCAGGCGCT GCACCAGCAC CGCAGCAACT GCCGGCTGAA CGACATGGCG
CGCGAGCTTC CGTTCCGGCA CGACGCAACG CTGCACGACC CCGCATTGAC CCTGGACGTG
TGCAGCCCCG GCCACTACGC GCGCCAGATT CCCGAGGACG TGGCGATCTA CTCCGTCTCG
GGCTGGTACG ACGGTGCCGG CTACAGCAAC TCGGCGATCA CGCGCTTCCT GACGCTGCCC
AGGCACCAGC ACCGCCTGCT GCTCGGCCCC TGGGACCACG GCGCGCGCAG CAACGTCTCG
CCCTGGCGCG AGCAGACCGG CTCCGACTTT CCGCTGCTGG CCGAAGTGCT GCGCTTCTTC
GACCATCACC TGCGCGGCAT CGATACCGGG CTCGACAGGG AGCAGCCGGT GCACTACTTC
ACCATCCACG ACGAGAAGTG GCAGGCCGCC GATGCATGGC CGCCAGTCGC GGGAACCCGC
CGTGTCCATC CCGATGCGAA CGGCGTGCTG GCGCTGCACG CACCCGCCGC GCCGGGCCGC
GACAGCTACC AGGTCGACTT CTCCGTCTCG ACCGGCCGCC AGACGCGGCT GGAACGGCTG
GGTGCCGTCG GCATCGAGCA CTACTACCCC GACTGGACCG AGCGCCAGGC GCAATACCTG
CACTACACCA GCGCACCGCT GGCTGCATCC GCCGAACTGA CGGGCCATGT GAGCGCGAGC
CTGCTGCTCG CATCGTCGGA GACCGATGCG GCCGTCTACG TCTATCTGAG CGAAGTGCTG
GCCGACGGCA GCTGCCGCTA CGTCACCGAA GGCCTGCTGC GGGCCTTGCA CCGCGAAGGC
CTGTCGCATT CGCCGGACTA CGTGGCGAGC TGGCCCGTGA ACACCTGCGA CCGTGCCTCG
GCCCGGCTGC TGGTGCCCCA CGAGCCCGCG CGCCTGGACT TCGCGCTGCT GCCGGTGTCG
TGGACCTTTG CCGCGGGCAG CCGCATACGG CTGTCGATTG GCGGCAGCGA CGAAGGCCAC
GGCCCGCAGG TGCCGCACGG GCGGCCGCCG CGCCTGGAAA TCCTTCGCGG CGCCGACGCC
AGCTGGTTCG ATCTTCCGCT GCGCGGCGCG CTGCGCTAA
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| Protein sequence | MSDRDSTPGA WHLPPSAYLA SRKPAFGLPG RPESLYVTMR DGCRIALDYY LPQASNGAQP
PARLPTLVIF TPYYRRFVTT DPTVEASPNC GRYRDFFVPH GYAVVVVDVR GTGASFGTRD
ALRSPKERDD YHEIAEWIVQ QPWSDGRIGS TGISYLGAAA VFLASTRHPA VKAIAPLFAV
TDIYTDQLYV GGVLSTIWTG RYDELMVALD QDDRPALAKF AYYGNPLFAG PQPVDADADG
RLLAQALHQH RSNCRLNDMA RELPFRHDAT LHDPALTLDV CSPGHYARQI PEDVAIYSVS
GWYDGAGYSN SAITRFLTLP RHQHRLLLGP WDHGARSNVS PWREQTGSDF PLLAEVLRFF
DHHLRGIDTG LDREQPVHYF TIHDEKWQAA DAWPPVAGTR RVHPDANGVL ALHAPAAPGR
DSYQVDFSVS TGRQTRLERL GAVGIEHYYP DWTERQAQYL HYTSAPLAAS AELTGHVSAS
LLLASSETDA AVYVYLSEVL ADGSCRYVTE GLLRALHREG LSHSPDYVAS WPVNTCDRAS
ARLLVPHEPA RLDFALLPVS WTFAAGSRIR LSIGGSDEGH GPQVPHGRPP RLEILRGADA
SWFDLPLRGA LR
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